Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNGA1P29973 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNGA1P29973 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
CNGA1P29973 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNGA1P29973 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNGA1P29973 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CNGA1P29973 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNGA1P29973 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNGA1P29973 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNGA1P29973 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNGA1P29973 REXO1L4P-201ENST00000605109 1937 ntBASIC16.81■□□□□ 0.28
CNGA1P29973 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CNGA1P29973 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNGA1P29973 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.81■□□□□ 0.28
CNGA1P29973 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.81■□□□□ 0.28
CNGA1P29973 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNGA1P29973 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.81■□□□□ 0.28
CNGA1P29973 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.81■□□□□ 0.28
CNGA1P29973 RPS9P1-201ENST00000419943 583 ntBASIC16.81■□□□□ 0.28
CNGA1P29973 RPL8P2-201ENST00000430538 502 ntBASIC16.81■□□□□ 0.28
CNGA1P29973 AC008723.1-201ENST00000506922 207 ntBASIC16.81■□□□□ 0.28
CNGA1P29973 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.81■□□□□ 0.28
CNGA1P29973 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.81■□□□□ 0.28
CNGA1P29973 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.81■□□□□ 0.28
CNGA1P29973 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CNGA1P29973 AC051619.9-201ENST00000623237 597 ntBASIC16.81■□□□□ 0.28
CNGA1P29973 AC009084.3-201ENST00000623356 437 ntBASIC16.81■□□□□ 0.28
CNGA1P29973 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.81■□□□□ 0.28
CNGA1P29973 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CNGA1P29973 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNGA1P29973 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CNGA1P29973 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNGA1P29973 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.81■□□□□ 0.28
CNGA1P29973 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CNGA1P29973 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CNGA1P29973 AC006058.4-201ENST00000624016 1670 ntBASIC16.81■□□□□ 0.28
CNGA1P29973 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNGA1P29973 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.81■□□□□ 0.28
CNGA1P29973 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.81■□□□□ 0.28
CNGA1P29973 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNGA1P29973 KRT8P21-201ENST00000430398 1491 ntBASIC16.8■□□□□ 0.28
CNGA1P29973 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNGA1P29973 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.8■□□□□ 0.28
CNGA1P29973 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNGA1P29973 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNGA1P29973 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.8■□□□□ 0.28
CNGA1P29973 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CNGA1P29973 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.8■□□□□ 0.28
CNGA1P29973 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNGA1P29973 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNGA1P29973 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNGA1P29973 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CNGA1P29973 FAM90A7P-201ENST00000382628 1395 ntBASIC16.8■□□□□ 0.28
CNGA1P29973 FAM90A23P-201ENST00000400136 1395 ntBASIC16.8■□□□□ 0.28
CNGA1P29973 CAP2P1-201ENST00000557743 1390 ntBASIC16.8■□□□□ 0.28
CNGA1P29973 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNGA1P29973 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.8■□□□□ 0.28
CNGA1P29973 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CNGA1P29973 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.8■□□□□ 0.28
CNGA1P29973 AC074138.1-201ENST00000611182 1303 ntBASIC16.8■□□□□ 0.28
CNGA1P29973 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNGA1P29973 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNGA1P29973 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNGA1P29973 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.8■□□□□ 0.28
CNGA1P29973 OR2K2-202ENST00000374428 1038 ntBASIC16.8■□□□□ 0.28
CNGA1P29973 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNGA1P29973 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNGA1P29973 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CNGA1P29973 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CNGA1P29973 HPGD-203ENST00000422112 805 ntTSL 2 BASIC16.8■□□□□ 0.28
CNGA1P29973 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.8■□□□□ 0.28
CNGA1P29973 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC16.8■□□□□ 0.28
CNGA1P29973 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNGA1P29973 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.8■□□□□ 0.28
CNGA1P29973 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
CNGA1P29973 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CNGA1P29973 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.8■□□□□ 0.28
CNGA1P29973 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CNGA1P29973 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNGA1P29973 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CNGA1P29973 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNGA1P29973 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.8■□□□□ 0.28
CNGA1P29973 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNGA1P29973 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNGA1P29973 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.8■□□□□ 0.28
CNGA1P29973 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNGA1P29973 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNGA1P29973 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNGA1P29973 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNGA1P29973 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CNGA1P29973 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNGA1P29973 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.8■□□□□ 0.28
CNGA1P29973 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.8■□□□□ 0.28
CNGA1P29973 AC012508.2-201ENST00000567613 1472 ntBASIC16.8■□□□□ 0.28
CNGA1P29973 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNGA1P29973 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CNGA1P29973 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CNGA1P29973 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNGA1P29973 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNGA1P29973 AP000845.1-201ENST00000581677 2131 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms