Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.13□□□□□ -0.47
SSSCA1O60232 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.13□□□□□ -0.47
SSSCA1O60232 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SSSCA1O60232 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.13□□□□□ -0.47
SSSCA1O60232 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.13□□□□□ -0.47
SSSCA1O60232 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.13□□□□□ -0.47
SSSCA1O60232 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.13□□□□□ -0.47
SSSCA1O60232 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSSCA1O60232 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
SSSCA1O60232 AL365181.3-201ENST00000605886 3222 ntBASIC12.13□□□□□ -0.47
SSSCA1O60232 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSSCA1O60232 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.13□□□□□ -0.47
SSSCA1O60232 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.13□□□□□ -0.47
SSSCA1O60232 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSSCA1O60232 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSSCA1O60232 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSSCA1O60232 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSSCA1O60232 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.13□□□□□ -0.47
SSSCA1O60232 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSSCA1O60232 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SSSCA1O60232 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSSCA1O60232 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSSCA1O60232 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSSCA1O60232 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.13□□□□□ -0.47
SSSCA1O60232 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SSSCA1O60232 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSSCA1O60232 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
SSSCA1O60232 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.13□□□□□ -0.47
SSSCA1O60232 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.13□□□□□ -0.47
SSSCA1O60232 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSSCA1O60232 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.13□□□□□ -0.47
SSSCA1O60232 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SSSCA1O60232 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SSSCA1O60232 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSSCA1O60232 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSSCA1O60232 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSSCA1O60232 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
SSSCA1O60232 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSSCA1O60232 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSSCA1O60232 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSSCA1O60232 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.12□□□□□ -0.47
SSSCA1O60232 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSSCA1O60232 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SSSCA1O60232 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SSSCA1O60232 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSSCA1O60232 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SSSCA1O60232 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSSCA1O60232 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
SSSCA1O60232 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSSCA1O60232 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSSCA1O60232 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSSCA1O60232 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SSSCA1O60232 TOMM22P5-201ENST00000416399 439 ntBASIC12.12□□□□□ -0.47
SSSCA1O60232 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.12□□□□□ -0.47
SSSCA1O60232 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.12□□□□□ -0.47
SSSCA1O60232 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC12.12□□□□□ -0.47
SSSCA1O60232 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSSCA1O60232 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.12□□□□□ -0.47
SSSCA1O60232 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.12□□□□□ -0.47
SSSCA1O60232 AC026150.2-201ENST00000564693 1156 ntBASIC12.12□□□□□ -0.47
SSSCA1O60232 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.12□□□□□ -0.47
SSSCA1O60232 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.12□□□□□ -0.47
SSSCA1O60232 AL589739.1-201ENST00000607720 493 ntBASIC12.12□□□□□ -0.47
SSSCA1O60232 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.12□□□□□ -0.47
SSSCA1O60232 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.12□□□□□ -0.47
SSSCA1O60232 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.12□□□□□ -0.47
SSSCA1O60232 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSSCA1O60232 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SSSCA1O60232 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SSSCA1O60232 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SSSCA1O60232 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSSCA1O60232 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSSCA1O60232 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSSCA1O60232 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
SSSCA1O60232 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.12□□□□□ -0.47
SSSCA1O60232 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.12□□□□□ -0.47
SSSCA1O60232 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSSCA1O60232 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.12□□□□□ -0.47
SSSCA1O60232 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSSCA1O60232 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
SSSCA1O60232 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.12□□□□□ -0.47
SSSCA1O60232 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSSCA1O60232 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSSCA1O60232 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSSCA1O60232 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSSCA1O60232 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSSCA1O60232 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.11□□□□□ -0.47
SSSCA1O60232 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SSSCA1O60232 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.11□□□□□ -0.47
SSSCA1O60232 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SSSCA1O60232 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
SSSCA1O60232 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
SSSCA1O60232 AC020658.7-201ENST00000624274 2442 ntBASIC12.11□□□□□ -0.47
SSSCA1O60232 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SSSCA1O60232 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.11□□□□□ -0.47
SSSCA1O60232 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.11□□□□□ -0.47
SSSCA1O60232 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
SSSCA1O60232 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSSCA1O60232 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SSSCA1O60232 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms