Protein–RNA interactions for Protein: O00291

HIP1, Huntingtin-interacting protein 1, humanhuman

Predictions only

Length 1,037 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIP1O00291 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC17.79■□□□□ 0.44
HIP1O00291 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HIP1O00291 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIP1O00291 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
HIP1O00291 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC17.78■□□□□ 0.44
HIP1O00291 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HIP1O00291 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HIP1O00291 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HIP1O00291 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIP1O00291 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.78■□□□□ 0.44
HIP1O00291 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIP1O00291 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIP1O00291 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIP1O00291 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HIP1O00291 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIP1O00291 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.78■□□□□ 0.44
HIP1O00291 MIR1909-201ENST00000411312 80 ntBASIC17.78■□□□□ 0.44
HIP1O00291 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.78■□□□□ 0.44
HIP1O00291 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HIP1O00291 AC027237.1-201ENST00000560942 655 ntBASIC17.78■□□□□ 0.44
HIP1O00291 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HIP1O00291 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.78■□□□□ 0.44
HIP1O00291 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIP1O00291 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC17.78■□□□□ 0.44
HIP1O00291 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HIP1O00291 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIP1O00291 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
HIP1O00291 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIP1O00291 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIP1O00291 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
HIP1O00291 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIP1O00291 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIP1O00291 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.78■□□□□ 0.44
HIP1O00291 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.78■□□□□ 0.44
HIP1O00291 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC17.78■□□□□ 0.44
HIP1O00291 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIP1O00291 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIP1O00291 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIP1O00291 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIP1O00291 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIP1O00291 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
HIP1O00291 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIP1O00291 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.77■□□□□ 0.44
HIP1O00291 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIP1O00291 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.77■□□□□ 0.44
HIP1O00291 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC17.77■□□□□ 0.44
HIP1O00291 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIP1O00291 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.77■□□□□ 0.44
HIP1O00291 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIP1O00291 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
HIP1O00291 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.77■□□□□ 0.44
HIP1O00291 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HIP1O00291 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HIP1O00291 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIP1O00291 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIP1O00291 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIP1O00291 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIP1O00291 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIP1O00291 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.77■□□□□ 0.44
HIP1O00291 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.77■□□□□ 0.44
HIP1O00291 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.77■□□□□ 0.44
HIP1O00291 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.77■□□□□ 0.44
HIP1O00291 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.77■□□□□ 0.44
HIP1O00291 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.77■□□□□ 0.44
HIP1O00291 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
HIP1O00291 AP006547.1-201ENST00000563435 692 ntBASIC17.77■□□□□ 0.44
HIP1O00291 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.77■□□□□ 0.44
HIP1O00291 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.77■□□□□ 0.44
HIP1O00291 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.77■□□□□ 0.44
HIP1O00291 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.77■□□□□ 0.43
HIP1O00291 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.77■□□□□ 0.43
HIP1O00291 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC17.77■□□□□ 0.43
HIP1O00291 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HIP1O00291 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
HIP1O00291 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HIP1O00291 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
HIP1O00291 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HIP1O00291 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HIP1O00291 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HIP1O00291 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HIP1O00291 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HIP1O00291 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIP1O00291 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIP1O00291 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC17.76■□□□□ 0.43
HIP1O00291 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HIP1O00291 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC17.76■□□□□ 0.43
HIP1O00291 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIP1O00291 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC17.76■□□□□ 0.43
HIP1O00291 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HIP1O00291 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.76■□□□□ 0.43
HIP1O00291 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIP1O00291 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIP1O00291 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIP1O00291 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HIP1O00291 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIP1O00291 ADK-205ENST00000539909 1866 ntTSL 2 BASIC17.76■□□□□ 0.43
HIP1O00291 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.76■□□□□ 0.43
HIP1O00291 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIP1O00291 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIP1O00291 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms