Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 GHSR-202ENST00000427970 912 ntBASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 CLUHP6-201ENST00000580789 941 ntBASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 AC015936.2-201ENST00000593177 259 ntBASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 AC133552.6-201ENST00000613406 534 ntBASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 INTS4P2-202ENST00000614726 2019 ntBASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 AC104989.1-201ENST00000519711 778 ntBASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 MIR4538-201ENST00000581377 78 ntBASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
DDX49Q9Y6V7 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 APP-205ENST00000358918 2366 ntTSL 5 BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 AC099336.1-201ENST00000417053 1171 ntBASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 AC092658.1-201ENST00000505836 891 ntBASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 AC005252.2-201ENST00000624630 1141 ntBASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX49Q9Y6V7 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms