Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 AC245100.3-201ENST00000441281 285 ntBASIC14.12□□□□□ -0.15
CCDC88CQ9P219 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 AC011840.2-201ENST00000563063 1520 ntBASIC14.12□□□□□ -0.15
CCDC88CQ9P219 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC88CQ9P219 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC88CQ9P219 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.11□□□□□ -0.15
CCDC88CQ9P219 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CCDC88CQ9P219 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC88CQ9P219 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC88CQ9P219 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.11□□□□□ -0.15
CCDC88CQ9P219 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC88CQ9P219 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.11□□□□□ -0.15
CCDC88CQ9P219 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CCDC88CQ9P219 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC88CQ9P219 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.11□□□□□ -0.15
CCDC88CQ9P219 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CCDC88CQ9P219 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CCDC88CQ9P219 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC88CQ9P219 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC88CQ9P219 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC88CQ9P219 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC88CQ9P219 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC88CQ9P219 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC88CQ9P219 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC88CQ9P219 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC88CQ9P219 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.11□□□□□ -0.15
CCDC88CQ9P219 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.11□□□□□ -0.15
CCDC88CQ9P219 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.11□□□□□ -0.15
CCDC88CQ9P219 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.11□□□□□ -0.15
CCDC88CQ9P219 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCDC88CQ9P219 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms