Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC007292.2-201ENST00000593524 1812 ntBASIC14.81□□□□□ -0.04
HMGB4Q8WW32 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 AC026320.2-201ENST00000434379 478 ntBASIC14.81□□□□□ -0.04
HMGB4Q8WW32 RN7SL258P-201ENST00000478664 300 ntBASIC14.81□□□□□ -0.04
HMGB4Q8WW32 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 AC131206.1-201ENST00000538078 1211 ntBASIC14.81□□□□□ -0.04
HMGB4Q8WW32 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 AC103810.10-201ENST00000606504 343 ntBASIC14.81□□□□□ -0.04
HMGB4Q8WW32 RN7SL736P-201ENST00000613111 269 ntBASIC14.81□□□□□ -0.04
HMGB4Q8WW32 MIR6769A-201ENST00000617340 73 ntBASIC14.81□□□□□ -0.04
HMGB4Q8WW32 AC133540.1-201ENST00000620845 1019 ntBASIC14.81□□□□□ -0.04
HMGB4Q8WW32 AC051619.9-201ENST00000623237 597 ntBASIC14.81□□□□□ -0.04
HMGB4Q8WW32 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 CYP4F23P-201ENST00000593402 1579 ntBASIC14.81□□□□□ -0.04
HMGB4Q8WW32 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HMGB4Q8WW32 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 AP000356.3-201ENST00000382243 753 ntBASIC14.8□□□□□ -0.04
HMGB4Q8WW32 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 AC078991.1-201ENST00000437297 610 ntBASIC14.8□□□□□ -0.04
HMGB4Q8WW32 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 AC026803.1-201ENST00000569130 274 ntBASIC14.8□□□□□ -0.04
HMGB4Q8WW32 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 AC015909.3-201ENST00000572855 1794 ntBASIC14.8□□□□□ -0.04
HMGB4Q8WW32 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGB4Q8WW32 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HMGB4Q8WW32 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGB4Q8WW32 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGB4Q8WW32 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGB4Q8WW32 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGB4Q8WW32 AC126755.1-201ENST00000525846 6405 ntBASIC14.79□□□□□ -0.04
HMGB4Q8WW32 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGB4Q8WW32 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGB4Q8WW32 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGB4Q8WW32 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGB4Q8WW32 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGB4Q8WW32 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HMGB4Q8WW32 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HMGB4Q8WW32 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms