Protein–RNA interactions for Protein: Q8TBY8

PMFBP1, Polyamine-modulated factor 1-binding protein 1, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1Q8TBY8 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 AC018463.1-201ENST00000456674 917 ntBASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 MRPL22P1-201ENST00000505398 616 ntBASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 AC073911.3-201ENST00000624401 631 ntBASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 AC005618.3-201ENST00000624928 458 ntBASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 R3HDM2P2-201ENST00000401880 2116 ntBASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PMFBP1Q8TBY8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC20.19■□□□□ 0.82
PMFBP1Q8TBY8 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PMFBP1Q8TBY8 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC20.19■□□□□ 0.82
PMFBP1Q8TBY8 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PMFBP1Q8TBY8 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PMFBP1Q8TBY8 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC20.19■□□□□ 0.82
PMFBP1Q8TBY8 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PMFBP1Q8TBY8 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC20.19■□□□□ 0.82
PMFBP1Q8TBY8 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC20.19■□□□□ 0.82
PMFBP1Q8TBY8 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC20.19■□□□□ 0.82
PMFBP1Q8TBY8 BUD31-205ENST00000456893 512 ntTSL 5 BASIC20.19■□□□□ 0.82
PMFBP1Q8TBY8 CHCHD2P9-201ENST00000461726 456 ntBASIC20.19■□□□□ 0.82
PMFBP1Q8TBY8 TMCO5B-205ENST00000530020 894 ntBASIC20.19■□□□□ 0.82
PMFBP1Q8TBY8 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC20.19■□□□□ 0.82
PMFBP1Q8TBY8 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC20.19■□□□□ 0.82
PMFBP1Q8TBY8 MIR6756-201ENST00000616240 63 ntBASIC20.19■□□□□ 0.82
PMFBP1Q8TBY8 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
PMFBP1Q8TBY8 CMC2-224ENST00000630396 481 ntTSL 5 BASIC20.19■□□□□ 0.82
PMFBP1Q8TBY8 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC20.19■□□□□ 0.82
PMFBP1Q8TBY8 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC20.19■□□□□ 0.82
PMFBP1Q8TBY8 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PMFBP1Q8TBY8 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PMFBP1Q8TBY8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
PMFBP1Q8TBY8 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PMFBP1Q8TBY8 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PMFBP1Q8TBY8 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC20.19■□□□□ 0.82
PMFBP1Q8TBY8 GSN-206ENST00000394353 2311 ntTSL 2 BASIC20.19■□□□□ 0.82
PMFBP1Q8TBY8 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC20.19■□□□□ 0.82
PMFBP1Q8TBY8 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 AC009560.1-201ENST00000620208 434 ntBASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 KRT8P31-201ENST00000504812 1408 ntBASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMFBP1Q8TBY8 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms