Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 KRT8P30-201ENST00000432100 650 ntBASIC20.24■□□□□ 0.83
UBR1Q8IWV7 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 HNRNPA3P6-201ENST00000472163 1006 ntBASIC20.24■□□□□ 0.83
UBR1Q8IWV7 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBR1Q8IWV7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC20.23■□□□□ 0.83
UBR1Q8IWV7 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBR1Q8IWV7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBR1Q8IWV7 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBR1Q8IWV7 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC20.23■□□□□ 0.83
UBR1Q8IWV7 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBR1Q8IWV7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBR1Q8IWV7 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBR1Q8IWV7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.23■□□□□ 0.83
UBR1Q8IWV7 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
UBR1Q8IWV7 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC20.23■□□□□ 0.83
UBR1Q8IWV7 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBR1Q8IWV7 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBR1Q8IWV7 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC20.23■□□□□ 0.83
UBR1Q8IWV7 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC20.23■□□□□ 0.83
UBR1Q8IWV7 AL049840.2-201ENST00000602722 535 ntBASIC20.23■□□□□ 0.83
UBR1Q8IWV7 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBR1Q8IWV7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBR1Q8IWV7 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
UBR1Q8IWV7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC20.23■□□□□ 0.83
UBR1Q8IWV7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBR1Q8IWV7 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBR1Q8IWV7 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBR1Q8IWV7 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBR1Q8IWV7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBR1Q8IWV7 U3.5-201ENST00000363448 216 ntBASIC20.22■□□□□ 0.83
UBR1Q8IWV7 ACTBP14-201ENST00000411655 1089 ntBASIC20.22■□□□□ 0.83
UBR1Q8IWV7 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC20.22■□□□□ 0.83
UBR1Q8IWV7 AC078814.4-201ENST00000546650 327 ntBASIC20.22■□□□□ 0.83
UBR1Q8IWV7 MT3-202ENST00000561640 514 ntTSL 3 BASIC20.22■□□□□ 0.83
UBR1Q8IWV7 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC20.22■□□□□ 0.83
UBR1Q8IWV7 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
UBR1Q8IWV7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBR1Q8IWV7 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBR1Q8IWV7 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBR1Q8IWV7 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
UBR1Q8IWV7 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBR1Q8IWV7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.22■□□□□ 0.83
UBR1Q8IWV7 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBR1Q8IWV7 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBR1Q8IWV7 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC20.22■□□□□ 0.83
UBR1Q8IWV7 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBR1Q8IWV7 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC20.22■□□□□ 0.83
UBR1Q8IWV7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBR1Q8IWV7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC20.22■□□□□ 0.83
UBR1Q8IWV7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBR1Q8IWV7 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBR1Q8IWV7 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBR1Q8IWV7 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBR1Q8IWV7 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
UBR1Q8IWV7 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBR1Q8IWV7 FDPSP7-201ENST00000429043 1054 ntBASIC20.22■□□□□ 0.83
UBR1Q8IWV7 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBR1Q8IWV7 VDAC1P11-201ENST00000458323 852 ntBASIC20.22■□□□□ 0.83
UBR1Q8IWV7 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC20.22■□□□□ 0.83
UBR1Q8IWV7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBR1Q8IWV7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.21■□□□□ 0.83
UBR1Q8IWV7 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC20.21■□□□□ 0.83
UBR1Q8IWV7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.21■□□□□ 0.83
UBR1Q8IWV7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
UBR1Q8IWV7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.21■□□□□ 0.83
UBR1Q8IWV7 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC20.21■□□□□ 0.83
UBR1Q8IWV7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBR1Q8IWV7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBR1Q8IWV7 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms