Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 AC068137.2-201ENST00000605408 478 ntBASIC12.36□□□□□ -0.43
ZNF546Q86UE3 MIR7706-201ENST00000613747 67 ntBASIC12.36□□□□□ -0.43
ZNF546Q86UE3 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 AC148477.8-201ENST00000624298 468 ntBASIC12.36□□□□□ -0.43
ZNF546Q86UE3 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 AC025580.3-201ENST00000617932 1424 ntBASIC12.36□□□□□ -0.43
ZNF546Q86UE3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF546Q86UE3 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 AC012313.10-201ENST00000623509 926 ntBASIC12.35□□□□□ -0.43
ZNF546Q86UE3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 REXO1L1P-201ENST00000379010 6598 ntBASIC12.35□□□□□ -0.43
ZNF546Q86UE3 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.35□□□□□ -0.43
ZNF546Q86UE3 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 VENTXP1-201ENST00000569334 2716 ntBASIC12.35□□□□□ -0.43
ZNF546Q86UE3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
ZNF546Q86UE3 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms