Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 RNU1-114P-201ENST00000365297 166 ntBASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 GIMAP3P-201ENST00000495150 836 ntBASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 LINC02560-201ENST00000596379 459 ntBASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
HIST3H2AQ7L7L0 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
HIST3H2AQ7L7L0 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
HIST3H2AQ7L7L0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
HIST3H2AQ7L7L0 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
HIST3H2AQ7L7L0 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.58□□□□□ -0.23
HIST3H2AQ7L7L0 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
HIST3H2AQ7L7L0 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 ACKR1-201ENST00000368121 1240 ntBASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 AL162726.2-201ENST00000438986 1017 ntBASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 DUX4L47-201ENST00000566374 394 ntBASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 AP001063.1-201ENST00000568332 529 ntBASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 CHCHD2P3-201ENST00000603038 451 ntBASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 AL096865.1-201ENST00000606796 927 ntBASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 AL359183.1-201ENST00000623796 2132 ntBASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2AQ7L7L0 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HIST3H2AQ7L7L0 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HIST3H2AQ7L7L0 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
HIST3H2AQ7L7L0 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms