Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.06□□□□□ -0.32
C11orf88Q6PI97 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 HLA-H-201ENST00000383620 1096 ntBASIC13.05□□□□□ -0.32
C11orf88Q6PI97 AL035633.1-201ENST00000406139 838 ntBASIC13.05□□□□□ -0.32
C11orf88Q6PI97 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 AC098859.1-201ENST00000502915 1238 ntBASIC13.05□□□□□ -0.32
C11orf88Q6PI97 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 AL035456.1-201ENST00000456064 1369 ntBASIC13.05□□□□□ -0.32
C11orf88Q6PI97 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf88Q6PI97 PPT1-213ENST00000641319 2388 ntBASIC13.05□□□□□ -0.32
C11orf88Q6PI97 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 BNIP3P1-202ENST00000550043 1585 ntBASIC13.04□□□□□ -0.32
C11orf88Q6PI97 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 AC027307.3-201ENST00000594262 1100 ntBASIC13.04□□□□□ -0.32
C11orf88Q6PI97 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 AC018529.1-201ENST00000613063 361 ntBASIC13.04□□□□□ -0.32
C11orf88Q6PI97 SPTSSB-204ENST00000617024 1292 ntBASIC13.04□□□□□ -0.32
C11orf88Q6PI97 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 AC027612.1-201ENST00000445234 2395 ntBASIC13.04□□□□□ -0.32
C11orf88Q6PI97 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
C11orf88Q6PI97 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms