Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
SKP1P63208 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SKP1P63208 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SKP1P63208 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SKP1P63208 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SKP1P63208 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SKP1P63208 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SKP1P63208 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SKP1P63208 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SKP1P63208 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SKP1P63208 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.09□□□□□ -0.15
SKP1P63208 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.09□□□□□ -0.15
SKP1P63208 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SKP1P63208 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.09□□□□□ -0.15
SKP1P63208 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SKP1P63208 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SKP1P63208 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SKP1P63208 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SKP1P63208 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.09□□□□□ -0.15
SKP1P63208 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.09□□□□□ -0.15
SKP1P63208 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.09□□□□□ -0.15
SKP1P63208 RPS2P32-201ENST00000439199 892 ntBASIC14.09□□□□□ -0.15
SKP1P63208 PUDPP3-201ENST00000445368 636 ntBASIC14.09□□□□□ -0.15
SKP1P63208 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.09□□□□□ -0.15
SKP1P63208 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SKP1P63208 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SKP1P63208 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.09□□□□□ -0.15
SKP1P63208 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
SKP1P63208 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.09□□□□□ -0.15
SKP1P63208 AP006547.1-201ENST00000563435 692 ntBASIC14.09□□□□□ -0.15
SKP1P63208 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.09□□□□□ -0.15
SKP1P63208 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.09□□□□□ -0.15
SKP1P63208 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SKP1P63208 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.09□□□□□ -0.15
SKP1P63208 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SKP1P63208 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SKP1P63208 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SKP1P63208 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.09□□□□□ -0.15
SKP1P63208 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SKP1P63208 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SKP1P63208 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SKP1P63208 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SKP1P63208 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.09□□□□□ -0.15
SKP1P63208 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SKP1P63208 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SKP1P63208 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.09□□□□□ -0.15
SKP1P63208 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SKP1P63208 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.09□□□□□ -0.15
SKP1P63208 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.09□□□□□ -0.15
SKP1P63208 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
SKP1P63208 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.08□□□□□ -0.15
SKP1P63208 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SKP1P63208 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SKP1P63208 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SKP1P63208 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SKP1P63208 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SKP1P63208 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
SKP1P63208 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SKP1P63208 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SKP1P63208 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.08□□□□□ -0.16
SKP1P63208 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.08□□□□□ -0.16
SKP1P63208 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.08□□□□□ -0.16
SKP1P63208 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.08□□□□□ -0.16
SKP1P63208 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SKP1P63208 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SKP1P63208 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.08□□□□□ -0.16
SKP1P63208 FAM58BP-201ENST00000439056 645 ntBASIC14.08□□□□□ -0.16
SKP1P63208 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.08□□□□□ -0.16
SKP1P63208 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.08□□□□□ -0.16
SKP1P63208 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.08□□□□□ -0.16
SKP1P63208 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.08□□□□□ -0.16
SKP1P63208 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.08□□□□□ -0.16
SKP1P63208 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.08□□□□□ -0.16
SKP1P63208 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
SKP1P63208 RN7SL560P-201ENST00000577943 264 ntBASIC14.08□□□□□ -0.16
SKP1P63208 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.08□□□□□ -0.16
SKP1P63208 AL136301.1-201ENST00000615830 422 ntBASIC14.08□□□□□ -0.16
SKP1P63208 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.08□□□□□ -0.16
SKP1P63208 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 AC015818.8-201ENST00000587907 1519 ntBASIC14.08□□□□□ -0.16
SKP1P63208 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SKP1P63208 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms