Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ERVFC1-1P60608 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC11.61□□□□□ -0.55
ERVFC1-1P60608 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC11.61□□□□□ -0.55
ERVFC1-1P60608 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 CYP4F24P-201ENST00000586049 1580 ntBASIC11.6□□□□□ -0.55
ERVFC1-1P60608 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 AP002414.3-201ENST00000589352 1468 ntBASIC11.6□□□□□ -0.55
ERVFC1-1P60608 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 CRCP-205ENST00000431089 942 ntTSL 2 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 AC012640.2-201ENST00000561606 901 ntBASIC11.6□□□□□ -0.55
ERVFC1-1P60608 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 REXO1L4P-201ENST00000605109 1937 ntBASIC11.6□□□□□ -0.55
ERVFC1-1P60608 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ERVFC1-1P60608 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 TP73-203ENST00000357733 4899 ntTSL 5 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC11.59□□□□□ -0.55
ERVFC1-1P60608 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms