Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
HCFC1P51610 TMBIM7P-202ENST00000641474 1516 ntBASIC12.8□□□□□ -0.36
HCFC1P51610 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.8□□□□□ -0.36
HCFC1P51610 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HCFC1P51610 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
HCFC1P51610 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
HCFC1P51610 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC12.8□□□□□ -0.36
HCFC1P51610 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
HCFC1P51610 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HCFC1P51610 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.79□□□□□ -0.36
HCFC1P51610 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 AL357563.1-201ENST00000404728 395 ntBASIC12.79□□□□□ -0.36
HCFC1P51610 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 AC027237.1-201ENST00000560942 655 ntBASIC12.79□□□□□ -0.36
HCFC1P51610 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.79□□□□□ -0.36
HCFC1P51610 MIR6769A-201ENST00000617340 73 ntBASIC12.79□□□□□ -0.36
HCFC1P51610 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC12.79□□□□□ -0.36
HCFC1P51610 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.79□□□□□ -0.36
HCFC1P51610 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
HCFC1P51610 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
HCFC1P51610 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.79□□□□□ -0.36
HCFC1P51610 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.79□□□□□ -0.36
HCFC1P51610 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 ACE-204ENST00000428043 5120 ntTSL 2 BASIC12.79□□□□□ -0.36
HCFC1P51610 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 HPGD-203ENST00000422112 805 ntTSL 2 BASIC12.79□□□□□ -0.36
HCFC1P51610 TSPY25P-201ENST00000429463 745 ntBASIC12.79□□□□□ -0.36
HCFC1P51610 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.79□□□□□ -0.36
HCFC1P51610 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC12.79□□□□□ -0.36
HCFC1P51610 KRT18P66-201ENST00000452970 1269 ntBASIC12.79□□□□□ -0.36
HCFC1P51610 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.79□□□□□ -0.36
HCFC1P51610 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.79□□□□□ -0.36
HCFC1P51610 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
HCFC1P51610 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.79□□□□□ -0.36
HCFC1P51610 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.79□□□□□ -0.36
HCFC1P51610 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 AC084781.1-201ENST00000613737 656 ntBASIC12.79□□□□□ -0.36
HCFC1P51610 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
HCFC1P51610 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
HCFC1P51610 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.79□□□□□ -0.36
HCFC1P51610 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
HCFC1P51610 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HCFC1P51610 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HCFC1P51610 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HCFC1P51610 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HCFC1P51610 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HCFC1P51610 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
HCFC1P51610 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
HCFC1P51610 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HCFC1P51610 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HCFC1P51610 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
HCFC1P51610 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
HCFC1P51610 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HCFC1P51610 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HCFC1P51610 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC12.78□□□□□ -0.36
HCFC1P51610 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HCFC1P51610 BANF1P3-201ENST00000412556 261 ntBASIC12.78□□□□□ -0.36
HCFC1P51610 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HCFC1P51610 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HCFC1P51610 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HCFC1P51610 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HCFC1P51610 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.78□□□□□ -0.36
HCFC1P51610 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HCFC1P51610 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.78□□□□□ -0.36
HCFC1P51610 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.78□□□□□ -0.36
HCFC1P51610 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.78□□□□□ -0.36
HCFC1P51610 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HCFC1P51610 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms