Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 ERP29P1-201ENST00000442902 706 ntBASIC15.84■□□□□ 0.13
HOXC8P31273 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC15.84■□□□□ 0.13
HOXC8P31273 PIN4P1-201ENST00000451079 396 ntBASIC15.84■□□□□ 0.13
HOXC8P31273 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC15.84■□□□□ 0.13
HOXC8P31273 ALG1L13P-202ENST00000519320 584 ntBASIC15.84■□□□□ 0.13
HOXC8P31273 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC15.84■□□□□ 0.13
HOXC8P31273 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC15.84■□□□□ 0.13
HOXC8P31273 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC15.84■□□□□ 0.13
HOXC8P31273 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC15.84■□□□□ 0.13
HOXC8P31273 AC007250.1-201ENST00000608934 338 ntBASIC15.84■□□□□ 0.13
HOXC8P31273 AL132780.4-201ENST00000624870 1135 ntBASIC15.84■□□□□ 0.13
HOXC8P31273 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HOXC8P31273 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HOXC8P31273 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HOXC8P31273 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC15.84■□□□□ 0.13
HOXC8P31273 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HOXC8P31273 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HOXC8P31273 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HOXC8P31273 AC132872.4-202ENST00000622924 2756 ntBASIC15.84■□□□□ 0.13
HOXC8P31273 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
HOXC8P31273 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HOXC8P31273 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HOXC8P31273 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.84■□□□□ 0.13
HOXC8P31273 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HOXC8P31273 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HOXC8P31273 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HOXC8P31273 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
HOXC8P31273 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
HOXC8P31273 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.83■□□□□ 0.13
HOXC8P31273 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
HOXC8P31273 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.83■□□□□ 0.13
HOXC8P31273 AC025271.4-201ENST00000621477 1726 ntBASIC15.83■□□□□ 0.13
HOXC8P31273 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HOXC8P31273 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HOXC8P31273 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
HOXC8P31273 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HOXC8P31273 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.83■□□□□ 0.12
HOXC8P31273 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HOXC8P31273 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HOXC8P31273 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HOXC8P31273 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HOXC8P31273 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HOXC8P31273 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HOXC8P31273 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HOXC8P31273 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HOXC8P31273 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
HOXC8P31273 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HOXC8P31273 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HOXC8P31273 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC15.83■□□□□ 0.12
HOXC8P31273 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC15.83■□□□□ 0.12
HOXC8P31273 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HOXC8P31273 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC15.83■□□□□ 0.12
HOXC8P31273 RNA5SP417-201ENST00000516459 108 ntBASIC15.83■□□□□ 0.12
HOXC8P31273 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HOXC8P31273 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
HOXC8P31273 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC15.83■□□□□ 0.12
HOXC8P31273 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
HOXC8P31273 SIGLEC22P-201ENST00000599104 714 ntBASIC15.83■□□□□ 0.12
HOXC8P31273 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC15.83■□□□□ 0.12
HOXC8P31273 AL133467.4-201ENST00000602953 725 ntBASIC15.83■□□□□ 0.12
HOXC8P31273 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HOXC8P31273 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
HOXC8P31273 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HOXC8P31273 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
HOXC8P31273 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HOXC8P31273 CYP51A1P3-201ENST00000400072 1428 ntBASIC15.83■□□□□ 0.12
HOXC8P31273 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HOXC8P31273 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HOXC8P31273 AC126177.1-201ENST00000547829 2218 ntBASIC15.83■□□□□ 0.12
HOXC8P31273 AC006372.4-201ENST00000624122 1543 ntBASIC15.83■□□□□ 0.12
HOXC8P31273 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
HOXC8P31273 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
HOXC8P31273 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HOXC8P31273 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HOXC8P31273 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HOXC8P31273 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HOXC8P31273 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HOXC8P31273 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.82■□□□□ 0.12
HOXC8P31273 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HOXC8P31273 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HOXC8P31273 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.82■□□□□ 0.12
HOXC8P31273 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HOXC8P31273 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HOXC8P31273 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC15.82■□□□□ 0.12
HOXC8P31273 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC15.82■□□□□ 0.12
HOXC8P31273 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HOXC8P31273 DPY19L2P5-201ENST00000456300 331 ntBASIC15.82■□□□□ 0.12
HOXC8P31273 RN7SL818P-201ENST00000485099 259 ntBASIC15.82■□□□□ 0.12
HOXC8P31273 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC15.82■□□□□ 0.12
HOXC8P31273 CR383656.3-201ENST00000551315 183 ntBASIC15.82■□□□□ 0.12
HOXC8P31273 RN7SL725P-201ENST00000606439 259 ntBASIC15.82■□□□□ 0.12
HOXC8P31273 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HOXC8P31273 AC009084.3-201ENST00000623356 437 ntBASIC15.82■□□□□ 0.12
HOXC8P31273 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC15.82■□□□□ 0.12
HOXC8P31273 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HOXC8P31273 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.82■□□□□ 0.12
HOXC8P31273 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.82■□□□□ 0.12
HOXC8P31273 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.82■□□□□ 0.12
HOXC8P31273 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HOXC8P31273 CCT8L1P-201ENST00000465400 1674 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms