Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.88□□□□□ -0.19
NR4A1P22736 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.88□□□□□ -0.19
NR4A1P22736 AL096865.1-201ENST00000606796 927 ntBASIC13.88□□□□□ -0.19
NR4A1P22736 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
NR4A1P22736 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.88□□□□□ -0.19
NR4A1P22736 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NR4A1P22736 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.88□□□□□ -0.19
NR4A1P22736 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NR4A1P22736 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.88□□□□□ -0.19
NR4A1P22736 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NR4A1P22736 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.88□□□□□ -0.19
NR4A1P22736 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NR4A1P22736 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.88□□□□□ -0.19
NR4A1P22736 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NR4A1P22736 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NR4A1P22736 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.88□□□□□ -0.19
NR4A1P22736 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NR4A1P22736 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NR4A1P22736 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
NR4A1P22736 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NR4A1P22736 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.88□□□□□ -0.19
NR4A1P22736 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.88□□□□□ -0.19
NR4A1P22736 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NR4A1P22736 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NR4A1P22736 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NR4A1P22736 CYP4F24P-201ENST00000586049 1580 ntBASIC13.88□□□□□ -0.19
NR4A1P22736 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NR4A1P22736 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR4A1P22736 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NR4A1P22736 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NR4A1P22736 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR4A1P22736 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR4A1P22736 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR4A1P22736 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.87□□□□□ -0.19
NR4A1P22736 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR4A1P22736 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.87□□□□□ -0.19
NR4A1P22736 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NR4A1P22736 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR4A1P22736 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR4A1P22736 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.87□□□□□ -0.19
NR4A1P22736 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.87□□□□□ -0.19
NR4A1P22736 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
NR4A1P22736 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
NR4A1P22736 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NR4A1P22736 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NR4A1P22736 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.87□□□□□ -0.19
NR4A1P22736 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.87□□□□□ -0.19
NR4A1P22736 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.87□□□□□ -0.19
NR4A1P22736 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.87□□□□□ -0.19
NR4A1P22736 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.87□□□□□ -0.19
NR4A1P22736 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.87□□□□□ -0.19
NR4A1P22736 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR4A1P22736 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR4A1P22736 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NR4A1P22736 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.87□□□□□ -0.19
NR4A1P22736 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.87□□□□□ -0.19
NR4A1P22736 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.87□□□□□ -0.19
NR4A1P22736 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.87□□□□□ -0.19
NR4A1P22736 AL450472.2-201ENST00000603663 1156 ntBASIC13.87□□□□□ -0.19
NR4A1P22736 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
NR4A1P22736 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
NR4A1P22736 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NR4A1P22736 AL365181.3-201ENST00000605886 3222 ntBASIC13.87□□□□□ -0.19
NR4A1P22736 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR4A1P22736 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.87□□□□□ -0.19
NR4A1P22736 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.87□□□□□ -0.19
NR4A1P22736 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NR4A1P22736 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR4A1P22736 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
NR4A1P22736 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR4A1P22736 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
NR4A1P22736 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR4A1P22736 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NR4A1P22736 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.87□□□□□ -0.19
NR4A1P22736 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NR4A1P22736 AC087499.5-201ENST00000452760 1342 ntBASIC13.87□□□□□ -0.19
NR4A1P22736 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.87□□□□□ -0.19
NR4A1P22736 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
NR4A1P22736 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR4A1P22736 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.86□□□□□ -0.19
NR4A1P22736 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR4A1P22736 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR4A1P22736 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.86□□□□□ -0.19
NR4A1P22736 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR4A1P22736 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.86□□□□□ -0.19
NR4A1P22736 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.86□□□□□ -0.19
NR4A1P22736 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.86□□□□□ -0.19
NR4A1P22736 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR4A1P22736 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR4A1P22736 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.86□□□□□ -0.19
NR4A1P22736 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.86□□□□□ -0.19
NR4A1P22736 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR4A1P22736 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NR4A1P22736 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
NR4A1P22736 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NR4A1P22736 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR4A1P22736 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR4A1P22736 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NR4A1P22736 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NR4A1P22736 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms