Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
TCF4P15884 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCF4P15884 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TCF4P15884 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TCF4P15884 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TCF4P15884 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.42■□□□□ 0.06
TCF4P15884 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCF4P15884 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCF4P15884 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCF4P15884 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.42■□□□□ 0.06
TCF4P15884 KRT90P-201ENST00000549264 1064 ntBASIC15.42■□□□□ 0.06
TCF4P15884 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.42■□□□□ 0.06
TCF4P15884 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TCF4P15884 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.42■□□□□ 0.06
TCF4P15884 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.42■□□□□ 0.06
TCF4P15884 BX088702.1-201ENST00000610784 235 ntBASIC15.42■□□□□ 0.06
TCF4P15884 AC105233.6-201ENST00000642093 218 ntBASIC15.42■□□□□ 0.06
TCF4P15884 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCF4P15884 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCF4P15884 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
TCF4P15884 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
TCF4P15884 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.42■□□□□ 0.06
TCF4P15884 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TCF4P15884 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TCF4P15884 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TCF4P15884 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCF4P15884 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCF4P15884 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.42■□□□□ 0.06
TCF4P15884 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TCF4P15884 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCF4P15884 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TCF4P15884 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TCF4P15884 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TCF4P15884 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TCF4P15884 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
TCF4P15884 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TCF4P15884 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TCF4P15884 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TCF4P15884 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TCF4P15884 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
TCF4P15884 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TCF4P15884 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.41■□□□□ 0.06
TCF4P15884 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
TCF4P15884 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TCF4P15884 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TCF4P15884 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.41■□□□□ 0.06
TCF4P15884 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TCF4P15884 AC004945.1-201ENST00000416738 983 ntBASIC15.41■□□□□ 0.06
TCF4P15884 CNN2P8-201ENST00000421872 913 ntBASIC15.41■□□□□ 0.06
TCF4P15884 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.41■□□□□ 0.06
TCF4P15884 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.41■□□□□ 0.06
TCF4P15884 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.41■□□□□ 0.06
TCF4P15884 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.41■□□□□ 0.06
TCF4P15884 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TCF4P15884 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.41■□□□□ 0.06
TCF4P15884 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.41■□□□□ 0.06
TCF4P15884 AC073413.1-201ENST00000603927 732 ntBASIC15.41■□□□□ 0.06
TCF4P15884 AL022328.1-201ENST00000610050 478 ntBASIC15.41■□□□□ 0.06
TCF4P15884 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.41■□□□□ 0.06
TCF4P15884 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.41■□□□□ 0.06
TCF4P15884 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TCF4P15884 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TCF4P15884 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.41■□□□□ 0.06
TCF4P15884 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.41■□□□□ 0.06
TCF4P15884 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TCF4P15884 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TCF4P15884 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TCF4P15884 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TCF4P15884 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.41■□□□□ 0.06
TCF4P15884 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.41■□□□□ 0.06
TCF4P15884 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TCF4P15884 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.41■□□□□ 0.06
TCF4P15884 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TCF4P15884 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TCF4P15884 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TCF4P15884 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TCF4P15884 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.41■□□□□ 0.06
TCF4P15884 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.41■□□□□ 0.06
TCF4P15884 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TCF4P15884 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TCF4P15884 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.4■□□□□ 0.06
TCF4P15884 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.4■□□□□ 0.06
TCF4P15884 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCF4P15884 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCF4P15884 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCF4P15884 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCF4P15884 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCF4P15884 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TCF4P15884 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TCF4P15884 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCF4P15884 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCF4P15884 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCF4P15884 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TCF4P15884 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.4■□□□□ 0.06
TCF4P15884 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCF4P15884 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TCF4P15884 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TCF4P15884 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCF4P15884 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCF4P15884 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms