Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LAMP1P11279 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.06□□□□□ -0.16
LAMP1P11279 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.06□□□□□ -0.16
LAMP1P11279 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LAMP1P11279 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.06□□□□□ -0.16
LAMP1P11279 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LAMP1P11279 AC020910.6-201ENST00000623084 1459 ntBASIC14.06□□□□□ -0.16
LAMP1P11279 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
LAMP1P11279 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LAMP1P11279 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LAMP1P11279 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LAMP1P11279 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LAMP1P11279 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LAMP1P11279 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LAMP1P11279 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LAMP1P11279 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LAMP1P11279 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
LAMP1P11279 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LAMP1P11279 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LAMP1P11279 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LAMP1P11279 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LAMP1P11279 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LAMP1P11279 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LAMP1P11279 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
LAMP1P11279 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.05□□□□□ -0.16
LAMP1P11279 DGCR5-201ENST00000399539 862 ntBASIC14.05□□□□□ -0.16
LAMP1P11279 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LAMP1P11279 POM121L8P-201ENST00000417732 1281 ntBASIC14.05□□□□□ -0.16
LAMP1P11279 AC245100.3-201ENST00000441281 285 ntBASIC14.05□□□□□ -0.16
LAMP1P11279 POM121L9P-203ENST00000441984 1285 ntBASIC14.05□□□□□ -0.16
LAMP1P11279 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.05□□□□□ -0.16
LAMP1P11279 MESTP3-201ENST00000503460 968 ntBASIC14.05□□□□□ -0.16
LAMP1P11279 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.05□□□□□ -0.16
LAMP1P11279 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.05□□□□□ -0.16
LAMP1P11279 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.05□□□□□ -0.16
LAMP1P11279 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
LAMP1P11279 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LAMP1P11279 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LAMP1P11279 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
LAMP1P11279 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LAMP1P11279 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LAMP1P11279 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LAMP1P11279 AC011498.7-201ENST00000624986 2027 ntBASIC14.05□□□□□ -0.16
LAMP1P11279 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
LAMP1P11279 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.05□□□□□ -0.16
LAMP1P11279 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LAMP1P11279 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LAMP1P11279 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LAMP1P11279 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LAMP1P11279 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.05□□□□□ -0.16
LAMP1P11279 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LAMP1P11279 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LAMP1P11279 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LAMP1P11279 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LAMP1P11279 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.05□□□□□ -0.16
LAMP1P11279 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LAMP1P11279 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LAMP1P11279 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LAMP1P11279 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LAMP1P11279 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LAMP1P11279 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LAMP1P11279 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LAMP1P11279 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LAMP1P11279 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.04□□□□□ -0.16
LAMP1P11279 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LAMP1P11279 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LAMP1P11279 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.04□□□□□ -0.16
LAMP1P11279 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LAMP1P11279 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LAMP1P11279 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LAMP1P11279 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.04□□□□□ -0.16
LAMP1P11279 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.04□□□□□ -0.16
LAMP1P11279 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
LAMP1P11279 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.04□□□□□ -0.16
LAMP1P11279 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LAMP1P11279 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LAMP1P11279 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
LAMP1P11279 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LAMP1P11279 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LAMP1P11279 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LAMP1P11279 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LAMP1P11279 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LAMP1P11279 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.04□□□□□ -0.16
LAMP1P11279 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.04□□□□□ -0.16
LAMP1P11279 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.04□□□□□ -0.16
LAMP1P11279 TP53TG3HP-202ENST00000569755 579 ntBASIC14.04□□□□□ -0.16
LAMP1P11279 RPSAP52-203ENST00000622976 1023 ntBASIC14.04□□□□□ -0.16
LAMP1P11279 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LAMP1P11279 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LAMP1P11279 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LAMP1P11279 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.04□□□□□ -0.16
LAMP1P11279 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LAMP1P11279 AC134312.5-201ENST00000568031 1313 ntBASIC14.04□□□□□ -0.16
LAMP1P11279 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LAMP1P11279 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LAMP1P11279 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.04□□□□□ -0.16
LAMP1P11279 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LAMP1P11279 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LAMP1P11279 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LAMP1P11279 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms