Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ALDH1A1P00352 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.57■□□□□ 0.24
ALDH1A1P00352 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ALDH1A1P00352 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ALDH1A1P00352 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC16.57■□□□□ 0.24
ALDH1A1P00352 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC16.57■□□□□ 0.24
ALDH1A1P00352 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
ALDH1A1P00352 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.57■□□□□ 0.24
ALDH1A1P00352 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ALDH1A1P00352 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ALDH1A1P00352 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC16.57■□□□□ 0.24
ALDH1A1P00352 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ALDH1A1P00352 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
ALDH1A1P00352 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
ALDH1A1P00352 PPP1R2P4-201ENST00000424051 595 ntBASIC16.57■□□□□ 0.24
ALDH1A1P00352 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC16.57■□□□□ 0.24
ALDH1A1P00352 AC023141.7-201ENST00000430646 407 ntBASIC16.57■□□□□ 0.24
ALDH1A1P00352 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.57■□□□□ 0.24
ALDH1A1P00352 GRPEL2P1-201ENST00000453145 339 ntBASIC16.57■□□□□ 0.24
ALDH1A1P00352 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ALDH1A1P00352 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.57■□□□□ 0.24
ALDH1A1P00352 KNOP1P1-201ENST00000542108 989 ntBASIC16.57■□□□□ 0.24
ALDH1A1P00352 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ALDH1A1P00352 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
ALDH1A1P00352 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC16.57■□□□□ 0.24
ALDH1A1P00352 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.57■□□□□ 0.24
ALDH1A1P00352 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC16.57■□□□□ 0.24
ALDH1A1P00352 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ALDH1A1P00352 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ALDH1A1P00352 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ALDH1A1P00352 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.57■□□□□ 0.24
ALDH1A1P00352 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ALDH1A1P00352 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.57■□□□□ 0.24
ALDH1A1P00352 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.57■□□□□ 0.24
ALDH1A1P00352 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
ALDH1A1P00352 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ALDH1A1P00352 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.57■□□□□ 0.24
ALDH1A1P00352 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ALDH1A1P00352 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.56■□□□□ 0.24
ALDH1A1P00352 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ALDH1A1P00352 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.56■□□□□ 0.24
ALDH1A1P00352 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ALDH1A1P00352 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.56■□□□□ 0.24
ALDH1A1P00352 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.56■□□□□ 0.24
ALDH1A1P00352 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ALDH1A1P00352 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
ALDH1A1P00352 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ALDH1A1P00352 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ALDH1A1P00352 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.56■□□□□ 0.24
ALDH1A1P00352 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ALDH1A1P00352 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC16.56■□□□□ 0.24
ALDH1A1P00352 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ALDH1A1P00352 KRT18P4-201ENST00000422599 1288 ntBASIC16.56■□□□□ 0.24
ALDH1A1P00352 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC16.56■□□□□ 0.24
ALDH1A1P00352 RNLS-203ENST00000437752 525 ntTSL 2 BASIC16.56■□□□□ 0.24
ALDH1A1P00352 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC16.56■□□□□ 0.24
ALDH1A1P00352 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
ALDH1A1P00352 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC16.56■□□□□ 0.24
ALDH1A1P00352 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC16.56■□□□□ 0.24
ALDH1A1P00352 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
ALDH1A1P00352 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC16.56■□□□□ 0.24
ALDH1A1P00352 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC16.56■□□□□ 0.24
ALDH1A1P00352 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC16.56■□□□□ 0.24
ALDH1A1P00352 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
ALDH1A1P00352 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
ALDH1A1P00352 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ALDH1A1P00352 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ALDH1A1P00352 AC079328.2-201ENST00000561241 3354 ntBASIC16.56■□□□□ 0.24
ALDH1A1P00352 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ALDH1A1P00352 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ALDH1A1P00352 AC080080.1-201ENST00000625121 2420 ntBASIC16.56■□□□□ 0.24
ALDH1A1P00352 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.56■□□□□ 0.24
ALDH1A1P00352 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.56■□□□□ 0.24
ALDH1A1P00352 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
ALDH1A1P00352 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ALDH1A1P00352 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ALDH1A1P00352 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ALDH1A1P00352 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ALDH1A1P00352 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ALDH1A1P00352 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ALDH1A1P00352 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ALDH1A1P00352 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ALDH1A1P00352 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ALDH1A1P00352 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ALDH1A1P00352 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ALDH1A1P00352 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
ALDH1A1P00352 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC16.55■□□□□ 0.24
ALDH1A1P00352 LINC00265-2P-201ENST00000413372 782 ntBASIC16.55■□□□□ 0.24
ALDH1A1P00352 AC006987.1-201ENST00000413610 527 ntBASIC16.55■□□□□ 0.24
ALDH1A1P00352 AC004522.1-201ENST00000419978 654 ntBASIC16.55■□□□□ 0.24
ALDH1A1P00352 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC16.55■□□□□ 0.24
ALDH1A1P00352 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ALDH1A1P00352 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
ALDH1A1P00352 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC16.55■□□□□ 0.24
ALDH1A1P00352 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC16.55■□□□□ 0.24
ALDH1A1P00352 RPS23-207ENST00000511844 530 ntTSL 2 BASIC16.55■□□□□ 0.24
ALDH1A1P00352 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.55■□□□□ 0.24
ALDH1A1P00352 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC16.55■□□□□ 0.24
ALDH1A1P00352 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.55■□□□□ 0.24
ALDH1A1P00352 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms