Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LTN1O94822 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LTN1O94822 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LTN1O94822 MSANTD2P1-201ENST00000445341 1368 ntBASIC19.02■□□□□ 0.64
LTN1O94822 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LTN1O94822 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LTN1O94822 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
LTN1O94822 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LTN1O94822 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC19.02■□□□□ 0.64
LTN1O94822 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.02■□□□□ 0.64
LTN1O94822 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LTN1O94822 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
LTN1O94822 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LTN1O94822 AC106047.2-201ENST00000511723 743 ntBASIC19.02■□□□□ 0.64
LTN1O94822 AC226150.1-201ENST00000544259 466 ntBASIC19.02■□□□□ 0.64
LTN1O94822 SNORD3B-1-201ENST00000577988 758 ntBASIC19.02■□□□□ 0.64
LTN1O94822 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC19.02■□□□□ 0.64
LTN1O94822 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
LTN1O94822 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
LTN1O94822 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LTN1O94822 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC19.02■□□□□ 0.64
LTN1O94822 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
LTN1O94822 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC19.02■□□□□ 0.64
LTN1O94822 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
LTN1O94822 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LTN1O94822 GSN-209ENST00000449733 2702 ntTSL 2 BASIC19.02■□□□□ 0.63
LTN1O94822 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.02■□□□□ 0.63
LTN1O94822 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
LTN1O94822 MTHFR-210ENST00000641407 2387 ntBASIC19.01■□□□□ 0.63
LTN1O94822 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LTN1O94822 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LTN1O94822 OR52M2P-201ENST00000414298 959 ntBASIC19.01■□□□□ 0.63
LTN1O94822 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
LTN1O94822 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC19.01■□□□□ 0.63
LTN1O94822 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LTN1O94822 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LTN1O94822 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.01■□□□□ 0.63
LTN1O94822 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LTN1O94822 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LTN1O94822 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LTN1O94822 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LTN1O94822 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.01■□□□□ 0.63
LTN1O94822 AC126177.1-201ENST00000547829 2218 ntBASIC19.01■□□□□ 0.63
LTN1O94822 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LTN1O94822 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LTN1O94822 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC19.01■□□□□ 0.63
LTN1O94822 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LTN1O94822 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
LTN1O94822 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
LTN1O94822 NME4-203ENST00000397722 1232 ntTSL 2 BASIC19.01■□□□□ 0.63
LTN1O94822 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC19.01■□□□□ 0.63
LTN1O94822 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LTN1O94822 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC19.01■□□□□ 0.63
LTN1O94822 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LTN1O94822 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC19.01■□□□□ 0.63
LTN1O94822 AC145285.5-201ENST00000562217 361 ntBASIC19.01■□□□□ 0.63
LTN1O94822 RN7SL556P-201ENST00000582856 298 ntBASIC19.01■□□□□ 0.63
LTN1O94822 ODCP-201ENST00000459650 1639 ntBASIC19■□□□□ 0.63
LTN1O94822 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC19■□□□□ 0.63
LTN1O94822 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LTN1O94822 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC19■□□□□ 0.63
LTN1O94822 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC19■□□□□ 0.63
LTN1O94822 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC19■□□□□ 0.63
LTN1O94822 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LTN1O94822 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
LTN1O94822 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LTN1O94822 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LTN1O94822 PDXDC2P-206ENST00000534700 1315 ntBASIC19■□□□□ 0.63
LTN1O94822 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LTN1O94822 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LTN1O94822 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LTN1O94822 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC19■□□□□ 0.63
LTN1O94822 RN7SL767P-201ENST00000493013 295 ntBASIC19■□□□□ 0.63
LTN1O94822 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC19■□□□□ 0.63
LTN1O94822 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC19■□□□□ 0.63
LTN1O94822 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC19■□□□□ 0.63
LTN1O94822 AC008972.2-201ENST00000606587 494 ntBASIC19■□□□□ 0.63
LTN1O94822 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC19■□□□□ 0.63
LTN1O94822 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19■□□□□ 0.63
LTN1O94822 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC19■□□□□ 0.63
LTN1O94822 POR-201ENST00000394893 2532 ntTSL 5 BASIC19■□□□□ 0.63
LTN1O94822 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LTN1O94822 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LTN1O94822 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LTN1O94822 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LTN1O94822 HPD-204ENST00000543163 1709 ntTSL 5 BASIC19■□□□□ 0.63
LTN1O94822 FAM90A21P-201ENST00000510875 1396 ntBASIC19■□□□□ 0.63
LTN1O94822 FAM90A15P-201ENST00000514465 1395 ntBASIC19■□□□□ 0.63
LTN1O94822 FAM90A6P-201ENST00000515148 1394 ntBASIC19■□□□□ 0.63
LTN1O94822 FAM90A16P-201ENST00000526662 1395 ntBASIC19■□□□□ 0.63
LTN1O94822 FAM90A9P-201ENST00000527940 1395 ntBASIC19■□□□□ 0.63
LTN1O94822 FAM90A5P-201ENST00000528738 1395 ntBASIC19■□□□□ 0.63
LTN1O94822 FAM90A14P-201ENST00000530386 1395 ntBASIC19■□□□□ 0.63
LTN1O94822 FAM90A13P-201ENST00000534703 1395 ntBASIC19■□□□□ 0.63
LTN1O94822 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
LTN1O94822 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LTN1O94822 USP39-220ENST00000613444 2161 ntTSL 2 BASIC18.99■□□□□ 0.63
LTN1O94822 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LTN1O94822 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LTN1O94822 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms