Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC15.45■□□□□ 0.06
SOX1O00570 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC15.45■□□□□ 0.06
SOX1O00570 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SOX1O00570 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SOX1O00570 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.45■□□□□ 0.06
SOX1O00570 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
SOX1O00570 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SOX1O00570 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SOX1O00570 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SOX1O00570 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SOX1O00570 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SOX1O00570 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SOX1O00570 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.45■□□□□ 0.06
SOX1O00570 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SOX1O00570 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SOX1O00570 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
SOX1O00570 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.45■□□□□ 0.06
SOX1O00570 AP002353.1-201ENST00000528257 1599 ntBASIC15.45■□□□□ 0.06
SOX1O00570 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SOX1O00570 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SOX1O00570 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SOX1O00570 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SOX1O00570 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
SOX1O00570 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SOX1O00570 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SOX1O00570 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SOX1O00570 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SOX1O00570 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SOX1O00570 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.44■□□□□ 0.06
SOX1O00570 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SOX1O00570 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
SOX1O00570 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SOX1O00570 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SOX1O00570 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SOX1O00570 OR7E115P-201ENST00000382617 1024 ntBASIC15.44■□□□□ 0.06
SOX1O00570 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC15.44■□□□□ 0.06
SOX1O00570 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.44■□□□□ 0.06
SOX1O00570 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
SOX1O00570 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SOX1O00570 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC15.44■□□□□ 0.06
SOX1O00570 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SOX1O00570 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC15.44■□□□□ 0.06
SOX1O00570 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
SOX1O00570 RN7SL524P-201ENST00000581152 300 ntBASIC15.44■□□□□ 0.06
SOX1O00570 TYMSP2-201ENST00000589501 424 ntBASIC15.44■□□□□ 0.06
SOX1O00570 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC15.44■□□□□ 0.06
SOX1O00570 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC15.44■□□□□ 0.06
SOX1O00570 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
SOX1O00570 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
SOX1O00570 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SOX1O00570 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
SOX1O00570 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC15.44■□□□□ 0.06
SOX1O00570 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SOX1O00570 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SOX1O00570 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SOX1O00570 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
SOX1O00570 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SOX1O00570 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.44■□□□□ 0.06
SOX1O00570 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SOX1O00570 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.44■□□□□ 0.06
SOX1O00570 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
SOX1O00570 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SOX1O00570 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SOX1O00570 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX1O00570 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX1O00570 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX1O00570 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX1O00570 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC15.43■□□□□ 0.06
SOX1O00570 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX1O00570 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
SOX1O00570 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX1O00570 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.43■□□□□ 0.06
SOX1O00570 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SOX1O00570 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX1O00570 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SOX1O00570 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SOX1O00570 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX1O00570 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SOX1O00570 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SOX1O00570 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
SOX1O00570 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.43■□□□□ 0.06
SOX1O00570 THAP4-203ENST00000402545 833 ntTSL 5 BASIC15.43■□□□□ 0.06
SOX1O00570 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SOX1O00570 PSAT1P2-201ENST00000426107 972 ntBASIC15.43■□□□□ 0.06
SOX1O00570 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC15.43■□□□□ 0.06
SOX1O00570 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC15.43■□□□□ 0.06
SOX1O00570 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SOX1O00570 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.43■□□□□ 0.06
SOX1O00570 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC15.43■□□□□ 0.06
SOX1O00570 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SOX1O00570 MIR4746-201ENST00000579802 71 ntBASIC15.43■□□□□ 0.06
SOX1O00570 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC15.43■□□□□ 0.06
SOX1O00570 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX1O00570 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
SOX1O00570 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.43■□□□□ 0.06
SOX1O00570 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SOX1O00570 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.43■□□□□ 0.06
SOX1O00570 AL591122.2-201ENST00000624125 1853 ntBASIC15.43■□□□□ 0.06
SOX1O00570 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SOX1O00570 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms