Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC11.92□□□□□ -0.5
UPK2O00526 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC11.92□□□□□ -0.5
UPK2O00526 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC11.92□□□□□ -0.5
UPK2O00526 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC11.92□□□□□ -0.5
UPK2O00526 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC11.92□□□□□ -0.5
UPK2O00526 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC11.92□□□□□ -0.5
UPK2O00526 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC11.92□□□□□ -0.5
UPK2O00526 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
UPK2O00526 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
UPK2O00526 CICP4-201ENST00000447359 2812 ntBASIC11.92□□□□□ -0.5
UPK2O00526 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC11.92□□□□□ -0.5
UPK2O00526 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK2O00526 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UPK2O00526 TCAM1P-207ENST00000485295 1537 ntBASIC11.91□□□□□ -0.5
UPK2O00526 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UPK2O00526 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UPK2O00526 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
UPK2O00526 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
UPK2O00526 AC087386.2-201ENST00000623212 4637 ntBASIC11.91□□□□□ -0.5
UPK2O00526 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UPK2O00526 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
UPK2O00526 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
UPK2O00526 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UPK2O00526 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UPK2O00526 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC11.91□□□□□ -0.5
UPK2O00526 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UPK2O00526 GGCT-205ENST00000409436 954 ntTSL 3 BASIC11.91□□□□□ -0.5
UPK2O00526 PMS2P2-201ENST00000425039 1128 ntBASIC11.91□□□□□ -0.5
UPK2O00526 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC11.91□□□□□ -0.5
UPK2O00526 AL162726.2-201ENST00000438986 1017 ntBASIC11.91□□□□□ -0.5
UPK2O00526 AC093433.1-201ENST00000458048 571 ntBASIC11.91□□□□□ -0.5
UPK2O00526 CYMP-203ENST00000474680 1263 ntBASIC11.91□□□□□ -0.5
UPK2O00526 ELK1P1-201ENST00000485699 580 ntBASIC11.91□□□□□ -0.5
UPK2O00526 AC022137.2-201ENST00000503482 481 ntBASIC11.91□□□□□ -0.5
UPK2O00526 GCOM2-201ENST00000509133 1104 ntBASIC11.91□□□□□ -0.5
UPK2O00526 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UPK2O00526 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC11.91□□□□□ -0.5
UPK2O00526 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UPK2O00526 VPS18-202ENST00000558474 873 ntTSL 3 BASIC11.91□□□□□ -0.5
UPK2O00526 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC11.91□□□□□ -0.5
UPK2O00526 CU634019.7-201ENST00000624153 1185 ntBASIC11.91□□□□□ -0.5
UPK2O00526 FP236241.2-201ENST00000624906 1185 ntBASIC11.91□□□□□ -0.5
UPK2O00526 USE1-206ENST00000595101 1776 ntTSL 2 BASIC11.91□□□□□ -0.5
UPK2O00526 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC11.91□□□□□ -0.5
UPK2O00526 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
UPK2O00526 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UPK2O00526 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UPK2O00526 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UPK2O00526 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC11.91□□□□□ -0.5
UPK2O00526 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
UPK2O00526 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
UPK2O00526 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC11.91□□□□□ -0.5
UPK2O00526 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
UPK2O00526 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC11.91□□□□□ -0.5
UPK2O00526 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UPK2O00526 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC11.91□□□□□ -0.5
UPK2O00526 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UPK2O00526 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC11.91□□□□□ -0.5
UPK2O00526 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UPK2O00526 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
UPK2O00526 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UPK2O00526 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UPK2O00526 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UPK2O00526 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UPK2O00526 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
UPK2O00526 AC012617.1-204ENST00000586340 2305 ntBASIC11.91□□□□□ -0.5
UPK2O00526 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UPK2O00526 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
UPK2O00526 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
UPK2O00526 AC215219.1-201ENST00000400706 1817 ntBASIC11.9□□□□□ -0.5
UPK2O00526 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
UPK2O00526 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
UPK2O00526 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
UPK2O00526 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
UPK2O00526 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
UPK2O00526 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UPK2O00526 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UPK2O00526 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
UPK2O00526 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UPK2O00526 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
UPK2O00526 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC11.9□□□□□ -0.5
UPK2O00526 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
UPK2O00526 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC11.9□□□□□ -0.5
UPK2O00526 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UPK2O00526 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UPK2O00526 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
UPK2O00526 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UPK2O00526 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UPK2O00526 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UPK2O00526 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UPK2O00526 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC11.9□□□□□ -0.5
UPK2O00526 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
UPK2O00526 RN7SKP230-201ENST00000365642 335 ntBASIC11.9□□□□□ -0.5
UPK2O00526 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms