Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 RALA-201ENST00000005257 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 SLC44A4-203ENST00000375562 2505 ntTSL 2 BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 PM20D1-201ENST00000367136 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 EHD1-213ENST00000621096 3336 ntTSL 5 BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 AC087641.1-201ENST00000557561 1021 ntBASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 AL445250.1-201ENST00000641671 2259 ntBASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 OTUD6B-201ENST00000285420 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 FAM156B-203ENST00000593751 2942 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 FAM156A-201ENST00000596733 2942 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 AC009093.2-202ENST00000620513 2079 ntBASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 AC008620.2-201ENST00000510294 1569 ntBASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 AC007787.1-201ENST00000588095 1583 ntBASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 AP002754.1-201ENST00000506329 2349 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 LINC01164-201ENST00000341866 3384 ntTSL 2 BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 ADAM8-202ENST00000445355 3279 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 OSBP2-208ENST00000437268 3580 ntTSL 2 BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 MINOS1P3-201ENST00000457048 203 ntBASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 PRKCQ-203ENST00000539722 3224 ntTSL 2 BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 CTCFL-217ENST00000608425 2915 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 AP000550.4-202ENST00000639755 178 ntBASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms