Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
LINC00959A0A1B0GUT2 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
LINC00959A0A1B0GUT2 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
LINC00959A0A1B0GUT2 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
LINC00959A0A1B0GUT2 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
LINC00959A0A1B0GUT2 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC10.15□□□□□ -0.79
LINC00959A0A1B0GUT2 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
LINC00959A0A1B0GUT2 ADK-205ENST00000539909 1866 ntTSL 2 BASIC10.15□□□□□ -0.79
LINC00959A0A1B0GUT2 INE2-201ENST00000630399 1874 ntBASIC10.15□□□□□ -0.79
LINC00959A0A1B0GUT2 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 AC090505.1-201ENST00000430515 1834 ntBASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 AMT-232ENST00000636199 1546 ntTSL 5 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 RNU1-114P-201ENST00000365297 166 ntBASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 METTL26-204ENST00000397665 558 ntTSL 2 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 LBH-203ENST00000404397 543 ntTSL 4 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 SOCS2P1-201ENST00000417727 557 ntBASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 BASP1P1-201ENST00000430708 665 ntBASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 MYADML-201ENST00000474610 2147 ntBASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 CD81-207ENST00000481687 890 ntTSL 2 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 FADS2-205ENST00000517839 469 ntTSL 3 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 IFT20-206ENST00000578122 834 ntTSL 2 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 IFT20-208ENST00000578985 831 ntTSL 3 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00959A0A1B0GUT2 PPP1R26P4-201ENST00000619065 3527 ntBASIC10.13□□□□□ -0.79
LINC00959A0A1B0GUT2 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00959A0A1B0GUT2 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00959A0A1B0GUT2 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00959A0A1B0GUT2 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
LINC00959A0A1B0GUT2 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00959A0A1B0GUT2 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00959A0A1B0GUT2 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00959A0A1B0GUT2 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
LINC00959A0A1B0GUT2 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00959A0A1B0GUT2 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00959A0A1B0GUT2 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms