Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CMSS1Q9BQ75 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CMSS1Q9BQ75 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CMSS1Q9BQ75 AC083964.2-201ENST00000623988 2396 ntBASIC12.77□□□□□ -0.36
CMSS1Q9BQ75 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
CMSS1Q9BQ75 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CMSS1Q9BQ75 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CMSS1Q9BQ75 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CMSS1Q9BQ75 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 RPSAP43-201ENST00000402237 625 ntBASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 UPF3AP3-201ENST00000420996 769 ntBASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 BX842568.4-201ENST00000421222 227 ntBASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 CNN2P11-201ENST00000429351 262 ntBASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.77□□□□□ -0.37
CMSS1Q9BQ75 AL359881.3-201ENST00000602640 1721 ntBASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 AC044860.1-202ENST00000559481 777 ntBASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 AC092053.3-201ENST00000641308 4975 ntBASIC12.76□□□□□ -0.37
CMSS1Q9BQ75 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CMSS1Q9BQ75 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CMSS1Q9BQ75 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
CMSS1Q9BQ75 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.75□□□□□ -0.37
CMSS1Q9BQ75 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CMSS1Q9BQ75 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CMSS1Q9BQ75 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CMSS1Q9BQ75 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms