Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
LITAFQ99732 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC9.86□□□□□ -0.83
LITAFQ99732 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC9.86□□□□□ -0.83
LITAFQ99732 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC9.86□□□□□ -0.83
LITAFQ99732 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 SKP2-204ENST00000508514 821 ntTSL 3 BASIC9.86□□□□□ -0.83
LITAFQ99732 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC9.86□□□□□ -0.83
LITAFQ99732 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC9.86□□□□□ -0.83
LITAFQ99732 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC9.86□□□□□ -0.83
LITAFQ99732 RNF34-208ENST00000555076 593 ntTSL 3 BASIC9.86□□□□□ -0.83
LITAFQ99732 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC9.86□□□□□ -0.83
LITAFQ99732 PDPK2P-202ENST00000562415 1191 ntBASIC9.86□□□□□ -0.83
LITAFQ99732 AL049597.2-201ENST00000565575 961 ntBASIC9.86□□□□□ -0.83
LITAFQ99732 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC9.86□□□□□ -0.83
LITAFQ99732 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC9.86□□□□□ -0.83
LITAFQ99732 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 AC060814.4-201ENST00000594169 2163 ntBASIC9.86□□□□□ -0.83
LITAFQ99732 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC9.86□□□□□ -0.83
LITAFQ99732 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC9.86□□□□□ -0.83
LITAFQ99732 AC093458.2-201ENST00000623150 629 ntBASIC9.86□□□□□ -0.83
LITAFQ99732 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC9.86□□□□□ -0.83
LITAFQ99732 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC9.86□□□□□ -0.83
LITAFQ99732 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
LITAFQ99732 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC9.86□□□□□ -0.83
LITAFQ99732 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 PCDHA6-201ENST00000378126 3267 ntBASIC9.86□□□□□ -0.83
LITAFQ99732 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC9.86□□□□□ -0.83
LITAFQ99732 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
LITAFQ99732 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC9.86□□□□□ -0.83
LITAFQ99732 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
LITAFQ99732 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC9.86□□□□□ -0.83
LITAFQ99732 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC9.86□□□□□ -0.83
LITAFQ99732 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC9.86□□□□□ -0.83
LITAFQ99732 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
LITAFQ99732 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 PCDHB19P-202ENST00000625133 2914 ntBASIC9.86□□□□□ -0.83
LITAFQ99732 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
LITAFQ99732 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC9.85□□□□□ -0.83
LITAFQ99732 AP003969.2-201ENST00000623739 2275 ntBASIC9.85□□□□□ -0.83
LITAFQ99732 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC9.85□□□□□ -0.83
LITAFQ99732 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
LITAFQ99732 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
LITAFQ99732 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC9.85□□□□□ -0.83
LITAFQ99732 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC9.85□□□□□ -0.83
LITAFQ99732 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC9.85□□□□□ -0.83
LITAFQ99732 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
LITAFQ99732 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
LITAFQ99732 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LITAFQ99732 AC026271.4-201ENST00000578214 1833 ntBASIC9.85□□□□□ -0.83
LITAFQ99732 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LITAFQ99732 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LITAFQ99732 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
LITAFQ99732 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC9.85□□□□□ -0.83
LITAFQ99732 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC9.85□□□□□ -0.83
LITAFQ99732 TOMM22P5-201ENST00000416399 439 ntBASIC9.85□□□□□ -0.83
LITAFQ99732 AL671277.1-201ENST00000429656 993 ntBASIC9.85□□□□□ -0.83
LITAFQ99732 SPCS2P4-201ENST00000436160 681 ntBASIC9.85□□□□□ -0.83
LITAFQ99732 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC9.85□□□□□ -0.83
LITAFQ99732 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC9.85□□□□□ -0.83
LITAFQ99732 RN7SL589P-201ENST00000481268 310 ntBASIC9.85□□□□□ -0.83
LITAFQ99732 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LITAFQ99732 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC9.85□□□□□ -0.83
LITAFQ99732 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
LITAFQ99732 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC9.85□□□□□ -0.83
LITAFQ99732 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC9.85□□□□□ -0.83
LITAFQ99732 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
LITAFQ99732 BMF-207ENST00000559701 630 ntTSL 3 BASIC9.85□□□□□ -0.83
LITAFQ99732 AC243562.1-201ENST00000560672 389 ntBASIC9.85□□□□□ -0.83
LITAFQ99732 AC026150.2-201ENST00000564693 1156 ntBASIC9.85□□□□□ -0.83
LITAFQ99732 KRT18P8-201ENST00000581937 1246 ntBASIC9.85□□□□□ -0.83
LITAFQ99732 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
LITAFQ99732 PRKN-208ENST00000610470 531 ntTSL 2 BASIC9.85□□□□□ -0.83
LITAFQ99732 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
LITAFQ99732 PRKN-209ENST00000612485 225 ntTSL 5 BASIC9.85□□□□□ -0.83
LITAFQ99732 AF228730.6-201ENST00000641497 218 ntBASIC9.85□□□□□ -0.83
LITAFQ99732 AC084121.3-201ENST00000641716 218 ntBASIC9.85□□□□□ -0.83
LITAFQ99732 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LITAFQ99732 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LITAFQ99732 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
LITAFQ99732 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC9.85□□□□□ -0.83
LITAFQ99732 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LITAFQ99732 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
LITAFQ99732 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
LITAFQ99732 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms