Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AC023274.1-201ENST00000418278 595 ntBASIC12.89□□□□□ -0.35
BEST4Q8NFU0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 AC003101.2-201ENST00000612557 442 ntBASIC12.89□□□□□ -0.35
BEST4Q8NFU0 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 AC074338.1-201ENST00000416825 156 ntBASIC12.88□□□□□ -0.35
BEST4Q8NFU0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 AL354702.1-201ENST00000442006 1960 ntBASIC12.88□□□□□ -0.35
BEST4Q8NFU0 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
BEST4Q8NFU0 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 LILRP1-201ENST00000444199 1370 ntBASIC12.87□□□□□ -0.35
BEST4Q8NFU0 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 AL590627.1-203ENST00000421194 1026 ntBASIC12.87□□□□□ -0.35
BEST4Q8NFU0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.87□□□□□ -0.35
BEST4Q8NFU0 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms