Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 AL139094.1-201ENST00000405549 1188 ntBASIC15.76■□□□□ 0.11
RNF135Q8IUD6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 AC090142.2-201ENST00000483263 416 ntBASIC15.76■□□□□ 0.11
RNF135Q8IUD6 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 GMFG-209ENST00000600322 622 ntTSL 5 BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 AC068587.8-201ENST00000641239 219 ntBASIC15.76■□□□□ 0.11
RNF135Q8IUD6 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 AL109954.1-202ENST00000564051 2148 ntBASIC15.76■□□□□ 0.11
RNF135Q8IUD6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 TNRC18P2-201ENST00000417666 2714 ntBASIC15.75■□□□□ 0.11
RNF135Q8IUD6 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 OR2I1P-209ENST00000641730 5365 ntBASIC15.75■□□□□ 0.11
RNF135Q8IUD6 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 POM121L8P-201ENST00000417732 1281 ntBASIC15.75■□□□□ 0.11
RNF135Q8IUD6 ISCA2P1-201ENST00000425548 448 ntBASIC15.75■□□□□ 0.11
RNF135Q8IUD6 POM121L9P-203ENST00000441984 1285 ntBASIC15.75■□□□□ 0.11
RNF135Q8IUD6 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 AC141586.1-203ENST00000567242 366 ntBASIC15.75■□□□□ 0.11
RNF135Q8IUD6 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 AL136295.7-201ENST00000619226 1200 ntBASIC15.75■□□□□ 0.11
RNF135Q8IUD6 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 AC006486.2-201ENST00000624246 2199 ntBASIC15.75■□□□□ 0.11
RNF135Q8IUD6 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.75■□□□□ 0.11
RNF135Q8IUD6 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms