Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.28□□□□□ -0.28
LRRC28Q86X40 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.28□□□□□ -0.28
LRRC28Q86X40 SPDYE18-201ENST00000510091 1050 ntBASIC13.28□□□□□ -0.28
LRRC28Q86X40 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.28□□□□□ -0.28
LRRC28Q86X40 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LRRC28Q86X40 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.28□□□□□ -0.28
LRRC28Q86X40 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
LRRC28Q86X40 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.28□□□□□ -0.28
LRRC28Q86X40 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.28□□□□□ -0.28
LRRC28Q86X40 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.28□□□□□ -0.28
LRRC28Q86X40 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LRRC28Q86X40 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LRRC28Q86X40 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRC28Q86X40 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRC28Q86X40 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRC28Q86X40 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
LRRC28Q86X40 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRC28Q86X40 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRC28Q86X40 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LRRC28Q86X40 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.28□□□□□ -0.28
LRRC28Q86X40 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
LRRC28Q86X40 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.28□□□□□ -0.28
LRRC28Q86X40 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRC28Q86X40 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.28□□□□□ -0.28
LRRC28Q86X40 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRC28Q86X40 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.28□□□□□ -0.28
LRRC28Q86X40 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRC28Q86X40 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRC28Q86X40 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRRC28Q86X40 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.27□□□□□ -0.28
LRRC28Q86X40 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.27□□□□□ -0.28
LRRC28Q86X40 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LRRC28Q86X40 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
LRRC28Q86X40 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LRRC28Q86X40 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
LRRC28Q86X40 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LRRC28Q86X40 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRRC28Q86X40 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.27□□□□□ -0.28
LRRC28Q86X40 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LRRC28Q86X40 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRRC28Q86X40 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRRC28Q86X40 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LRRC28Q86X40 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRRC28Q86X40 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRRC28Q86X40 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
LRRC28Q86X40 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRRC28Q86X40 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRRC28Q86X40 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRRC28Q86X40 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
LRRC28Q86X40 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
LRRC28Q86X40 AC104457.1-201ENST00000401024 814 ntBASIC13.27□□□□□ -0.29
LRRC28Q86X40 AC087499.6-201ENST00000411576 835 ntBASIC13.27□□□□□ -0.29
LRRC28Q86X40 AC015922.1-201ENST00000421102 1152 ntBASIC13.27□□□□□ -0.29
LRRC28Q86X40 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.27□□□□□ -0.29
LRRC28Q86X40 MEIS3P1-201ENST00000495167 958 ntBASIC13.27□□□□□ -0.29
LRRC28Q86X40 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LRRC28Q86X40 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.27□□□□□ -0.29
LRRC28Q86X40 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
LRRC28Q86X40 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.27□□□□□ -0.29
LRRC28Q86X40 SPDYE22P-201ENST00000582158 798 ntBASIC13.27□□□□□ -0.29
LRRC28Q86X40 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
LRRC28Q86X40 AL132655.2-201ENST00000596276 594 ntBASIC13.27□□□□□ -0.29
LRRC28Q86X40 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.27□□□□□ -0.29
LRRC28Q86X40 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRRC28Q86X40 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.27□□□□□ -0.29
LRRC28Q86X40 AL662799.1-202ENST00000614205 422 ntBASIC13.27□□□□□ -0.29
LRRC28Q86X40 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRRC28Q86X40 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRRC28Q86X40 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
LRRC28Q86X40 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
LRRC28Q86X40 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRRC28Q86X40 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRRC28Q86X40 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LRRC28Q86X40 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRRC28Q86X40 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.27□□□□□ -0.29
LRRC28Q86X40 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRRC28Q86X40 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRRC28Q86X40 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LRRC28Q86X40 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRRC28Q86X40 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRRC28Q86X40 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRRC28Q86X40 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
LRRC28Q86X40 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
LRRC28Q86X40 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
LRRC28Q86X40 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LRRC28Q86X40 INE2-201ENST00000630399 1874 ntBASIC13.27□□□□□ -0.29
LRRC28Q86X40 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.27□□□□□ -0.29
LRRC28Q86X40 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.27□□□□□ -0.29
LRRC28Q86X40 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRRC28Q86X40 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRRC28Q86X40 AC015909.5-201ENST00000624336 2266 ntBASIC13.27□□□□□ -0.29
LRRC28Q86X40 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRRC28Q86X40 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
LRRC28Q86X40 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRC28Q86X40 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRC28Q86X40 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRC28Q86X40 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRC28Q86X40 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
LRRC28Q86X40 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRC28Q86X40 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms