Protein–RNA interactions for Protein: Q6PCB8

EMB, Embigin, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMBQ6PCB8 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMBQ6PCB8 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EMBQ6PCB8 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMBQ6PCB8 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
EMBQ6PCB8 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMBQ6PCB8 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMBQ6PCB8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMBQ6PCB8 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EMBQ6PCB8 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
EMBQ6PCB8 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMBQ6PCB8 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMBQ6PCB8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.3■□□□□ 0.04
EMBQ6PCB8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EMBQ6PCB8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMBQ6PCB8 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMBQ6PCB8 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
EMBQ6PCB8 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
EMBQ6PCB8 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMBQ6PCB8 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMBQ6PCB8 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMBQ6PCB8 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMBQ6PCB8 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
EMBQ6PCB8 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMBQ6PCB8 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMBQ6PCB8 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMBQ6PCB8 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EMBQ6PCB8 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EMBQ6PCB8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.3■□□□□ 0.04
EMBQ6PCB8 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.3■□□□□ 0.04
EMBQ6PCB8 AL080243.2-201ENST00000418783 582 ntBASIC15.3■□□□□ 0.04
EMBQ6PCB8 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.3■□□□□ 0.04
EMBQ6PCB8 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.3■□□□□ 0.04
EMBQ6PCB8 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.3■□□□□ 0.04
EMBQ6PCB8 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMBQ6PCB8 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.3■□□□□ 0.04
EMBQ6PCB8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.3■□□□□ 0.04
EMBQ6PCB8 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.3■□□□□ 0.04
EMBQ6PCB8 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
EMBQ6PCB8 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.3■□□□□ 0.04
EMBQ6PCB8 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EMBQ6PCB8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.3■□□□□ 0.04
EMBQ6PCB8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.3■□□□□ 0.04
EMBQ6PCB8 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EMBQ6PCB8 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMBQ6PCB8 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.3■□□□□ 0.04
EMBQ6PCB8 AL031595.1-201ENST00000623969 4709 ntBASIC15.3■□□□□ 0.04
EMBQ6PCB8 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
EMBQ6PCB8 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
EMBQ6PCB8 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
EMBQ6PCB8 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
EMBQ6PCB8 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EMBQ6PCB8 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
EMBQ6PCB8 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EMBQ6PCB8 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EMBQ6PCB8 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.29■□□□□ 0.04
EMBQ6PCB8 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EMBQ6PCB8 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EMBQ6PCB8 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
EMBQ6PCB8 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EMBQ6PCB8 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EMBQ6PCB8 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
EMBQ6PCB8 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EMBQ6PCB8 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EMBQ6PCB8 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EMBQ6PCB8 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EMBQ6PCB8 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC15.29■□□□□ 0.04
EMBQ6PCB8 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EMBQ6PCB8 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EMBQ6PCB8 TUBB8P4-201ENST00000511806 1324 ntBASIC15.29■□□□□ 0.04
EMBQ6PCB8 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EMBQ6PCB8 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EMBQ6PCB8 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EMBQ6PCB8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EMBQ6PCB8 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.29■□□□□ 0.04
EMBQ6PCB8 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.29■□□□□ 0.04
EMBQ6PCB8 AL353779.1-201ENST00000434793 351 ntBASIC15.29■□□□□ 0.04
EMBQ6PCB8 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.29■□□□□ 0.04
EMBQ6PCB8 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.29■□□□□ 0.04
EMBQ6PCB8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.29■□□□□ 0.04
EMBQ6PCB8 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.29■□□□□ 0.04
EMBQ6PCB8 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.29■□□□□ 0.04
EMBQ6PCB8 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EMBQ6PCB8 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EMBQ6PCB8 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
EMBQ6PCB8 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.29■□□□□ 0.04
EMBQ6PCB8 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
EMBQ6PCB8 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC15.29■□□□□ 0.04
EMBQ6PCB8 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
EMBQ6PCB8 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EMBQ6PCB8 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC15.29■□□□□ 0.04
EMBQ6PCB8 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
EMBQ6PCB8 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EMBQ6PCB8 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EMBQ6PCB8 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EMBQ6PCB8 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
EMBQ6PCB8 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
EMBQ6PCB8 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
EMBQ6PCB8 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EMBQ6PCB8 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
EMBQ6PCB8 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms