Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 MSANTD2P1-201ENST00000445341 1368 ntBASIC14.1□□□□□ -0.15
RIF1Q5UIP0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 B9D1-206ENST00000461069 923 ntTSL 2 BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 KRT18P37-201ENST00000520711 1282 ntBASIC14.1□□□□□ -0.15
RIF1Q5UIP0 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 AGGF1P1-201ENST00000509500 2073 ntBASIC14.1□□□□□ -0.15
RIF1Q5UIP0 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RIF1Q5UIP0 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 ASS1P2-201ENST00000439895 1223 ntBASIC14.09□□□□□ -0.15
RIF1Q5UIP0 RN7SL672P-201ENST00000474091 317 ntBASIC14.09□□□□□ -0.15
RIF1Q5UIP0 DPY19L2P4-201ENST00000479881 442 ntBASIC14.09□□□□□ -0.15
RIF1Q5UIP0 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 AC004801.1-201ENST00000549557 360 ntBASIC14.09□□□□□ -0.15
RIF1Q5UIP0 HNRNPA1P5-201ENST00000558213 966 ntBASIC14.09□□□□□ -0.15
RIF1Q5UIP0 TPST2P1-201ENST00000564073 1102 ntBASIC14.09□□□□□ -0.15
RIF1Q5UIP0 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 AC112220.4-201ENST00000604982 1263 ntBASIC14.09□□□□□ -0.15
RIF1Q5UIP0 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.09□□□□□ -0.15
RIF1Q5UIP0 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms