Protein–RNA interactions for Protein: P98155

VLDLR, Very low-density lipoprotein receptor, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLRP98155 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VLDLRP98155 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
VLDLRP98155 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VLDLRP98155 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
VLDLRP98155 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.93□□□□□ -0.18
VLDLRP98155 CLK3P2-201ENST00000427566 1453 ntBASIC13.93□□□□□ -0.18
VLDLRP98155 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VLDLRP98155 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VLDLRP98155 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VLDLRP98155 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.92□□□□□ -0.18
VLDLRP98155 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VLDLRP98155 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
VLDLRP98155 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.92□□□□□ -0.18
VLDLRP98155 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VLDLRP98155 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VLDLRP98155 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VLDLRP98155 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VLDLRP98155 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VLDLRP98155 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
VLDLRP98155 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VLDLRP98155 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VLDLRP98155 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VLDLRP98155 DRD5P1-201ENST00000456605 1438 ntBASIC13.92□□□□□ -0.18
VLDLRP98155 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VLDLRP98155 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.92□□□□□ -0.18
VLDLRP98155 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
VLDLRP98155 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
VLDLRP98155 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VLDLRP98155 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VLDLRP98155 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VLDLRP98155 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VLDLRP98155 GK-202ENST00000378941 458 ntTSL 3 BASIC13.92□□□□□ -0.18
VLDLRP98155 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.92□□□□□ -0.18
VLDLRP98155 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VLDLRP98155 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.92□□□□□ -0.18
VLDLRP98155 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VLDLRP98155 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.92□□□□□ -0.18
VLDLRP98155 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
VLDLRP98155 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.92□□□□□ -0.18
VLDLRP98155 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.92□□□□□ -0.18
VLDLRP98155 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
VLDLRP98155 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
VLDLRP98155 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VLDLRP98155 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VLDLRP98155 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VLDLRP98155 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.92□□□□□ -0.18
VLDLRP98155 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.92□□□□□ -0.18
VLDLRP98155 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VLDLRP98155 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VLDLRP98155 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
VLDLRP98155 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VLDLRP98155 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.92□□□□□ -0.18
VLDLRP98155 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VLDLRP98155 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VLDLRP98155 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VLDLRP98155 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VLDLRP98155 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VLDLRP98155 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
VLDLRP98155 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
VLDLRP98155 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VLDLRP98155 AC087499.5-201ENST00000452760 1342 ntBASIC13.91□□□□□ -0.18
VLDLRP98155 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.91□□□□□ -0.18
VLDLRP98155 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
VLDLRP98155 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VLDLRP98155 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
VLDLRP98155 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
VLDLRP98155 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VLDLRP98155 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VLDLRP98155 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.91□□□□□ -0.18
VLDLRP98155 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VLDLRP98155 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
VLDLRP98155 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
VLDLRP98155 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VLDLRP98155 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.91□□□□□ -0.18
VLDLRP98155 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.91□□□□□ -0.18
VLDLRP98155 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.91□□□□□ -0.18
VLDLRP98155 ZNF890P-202ENST00000530367 1156 ntBASIC13.91□□□□□ -0.18
VLDLRP98155 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.91□□□□□ -0.18
VLDLRP98155 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.91□□□□□ -0.18
VLDLRP98155 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.91□□□□□ -0.18
VLDLRP98155 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.91□□□□□ -0.18
VLDLRP98155 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.91□□□□□ -0.18
VLDLRP98155 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.91□□□□□ -0.18
VLDLRP98155 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.91□□□□□ -0.18
VLDLRP98155 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
VLDLRP98155 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.91□□□□□ -0.18
VLDLRP98155 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VLDLRP98155 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VLDLRP98155 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.91□□□□□ -0.18
VLDLRP98155 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
VLDLRP98155 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VLDLRP98155 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
VLDLRP98155 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VLDLRP98155 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
VLDLRP98155 AC020910.6-201ENST00000623084 1459 ntBASIC13.91□□□□□ -0.18
VLDLRP98155 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.91□□□□□ -0.18
VLDLRP98155 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.91□□□□□ -0.18
VLDLRP98155 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VLDLRP98155 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
VLDLRP98155 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms