Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SEC61A1P61619 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.1□□□□□ -0.31
SEC61A1P61619 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.1□□□□□ -0.31
SEC61A1P61619 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
SEC61A1P61619 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SEC61A1P61619 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SEC61A1P61619 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.09□□□□□ -0.31
SEC61A1P61619 AC131212.3-201ENST00000624087 4219 ntBASIC13.09□□□□□ -0.31
SEC61A1P61619 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.09□□□□□ -0.31
SEC61A1P61619 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SEC61A1P61619 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.09□□□□□ -0.31
SEC61A1P61619 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
SEC61A1P61619 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
SEC61A1P61619 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SEC61A1P61619 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.09□□□□□ -0.31
SEC61A1P61619 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
SEC61A1P61619 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.09□□□□□ -0.31
SEC61A1P61619 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.09□□□□□ -0.31
SEC61A1P61619 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.09□□□□□ -0.31
SEC61A1P61619 KRT17P7-201ENST00000451704 1104 ntBASIC13.09□□□□□ -0.31
SEC61A1P61619 RN7SL752P-201ENST00000463779 287 ntBASIC13.09□□□□□ -0.31
SEC61A1P61619 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
SEC61A1P61619 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.09□□□□□ -0.31
SEC61A1P61619 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 AC132938.2-201ENST00000579188 680 ntBASIC13.09□□□□□ -0.31
SEC61A1P61619 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.09□□□□□ -0.31
SEC61A1P61619 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.09□□□□□ -0.31
SEC61A1P61619 CU639417.3-201ENST00000624240 1404 ntBASIC13.09□□□□□ -0.31
SEC61A1P61619 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.09□□□□□ -0.31
SEC61A1P61619 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.09□□□□□ -0.31
SEC61A1P61619 AL591163.1-201ENST00000641757 987 ntBASIC13.09□□□□□ -0.31
SEC61A1P61619 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SEC61A1P61619 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.09□□□□□ -0.31
SEC61A1P61619 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SEC61A1P61619 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SEC61A1P61619 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SEC61A1P61619 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.08□□□□□ -0.31
SEC61A1P61619 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.31
SEC61A1P61619 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.31
SEC61A1P61619 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
SEC61A1P61619 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.08□□□□□ -0.32
SEC61A1P61619 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC61A1P61619 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SEC61A1P61619 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC61A1P61619 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.08□□□□□ -0.32
SEC61A1P61619 AC105206.1-202ENST00000314927 2368 ntBASIC13.08□□□□□ -0.32
SEC61A1P61619 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC61A1P61619 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.08□□□□□ -0.32
SEC61A1P61619 PEG13-201ENST00000631594 5667 ntBASIC13.08□□□□□ -0.32
SEC61A1P61619 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
SEC61A1P61619 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SEC61A1P61619 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.08□□□□□ -0.32
SEC61A1P61619 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC61A1P61619 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC61A1P61619 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SEC61A1P61619 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
SEC61A1P61619 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
SEC61A1P61619 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC61A1P61619 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
SEC61A1P61619 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SEC61A1P61619 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
SEC61A1P61619 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SEC61A1P61619 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.08□□□□□ -0.32
SEC61A1P61619 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.08□□□□□ -0.32
SEC61A1P61619 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.08□□□□□ -0.32
SEC61A1P61619 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.08□□□□□ -0.32
SEC61A1P61619 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.08□□□□□ -0.32
SEC61A1P61619 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.08□□□□□ -0.32
SEC61A1P61619 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.08□□□□□ -0.32
SEC61A1P61619 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.08□□□□□ -0.32
SEC61A1P61619 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms