Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRPF1P55201 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRPF1P55201 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRPF1P55201 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRPF1P55201 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.82■□□□□ 0.6
BRPF1P55201 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.82■□□□□ 0.6
BRPF1P55201 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRPF1P55201 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
BRPF1P55201 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRPF1P55201 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRPF1P55201 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC18.81■□□□□ 0.6
BRPF1P55201 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRPF1P55201 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRPF1P55201 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
BRPF1P55201 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRPF1P55201 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.81■□□□□ 0.6
BRPF1P55201 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRPF1P55201 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
BRPF1P55201 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRPF1P55201 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRPF1P55201 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRPF1P55201 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRPF1P55201 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRPF1P55201 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRPF1P55201 MIR326-201ENST00000362220 95 ntBASIC18.81■□□□□ 0.6
BRPF1P55201 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
BRPF1P55201 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC18.81■□□□□ 0.6
BRPF1P55201 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC18.81■□□□□ 0.6
BRPF1P55201 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC18.81■□□□□ 0.6
BRPF1P55201 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC18.81■□□□□ 0.6
BRPF1P55201 UPF3AP2-201ENST00000457924 1132 ntBASIC18.81■□□□□ 0.6
BRPF1P55201 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC18.81■□□□□ 0.6
BRPF1P55201 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRPF1P55201 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRPF1P55201 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC18.81■□□□□ 0.6
BRPF1P55201 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRPF1P55201 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
BRPF1P55201 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
BRPF1P55201 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRPF1P55201 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRPF1P55201 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRPF1P55201 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRPF1P55201 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRPF1P55201 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRPF1P55201 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRPF1P55201 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRPF1P55201 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
BRPF1P55201 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRPF1P55201 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
BRPF1P55201 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRPF1P55201 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRPF1P55201 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
BRPF1P55201 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRPF1P55201 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRPF1P55201 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BRPF1P55201 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
BRPF1P55201 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
BRPF1P55201 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC18.8■□□□□ 0.6
BRPF1P55201 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BRPF1P55201 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC18.8■□□□□ 0.6
BRPF1P55201 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BRPF1P55201 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRPF1P55201 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
BRPF1P55201 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BRPF1P55201 AC079178.1-201ENST00000420915 656 ntBASIC18.8■□□□□ 0.6
BRPF1P55201 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
BRPF1P55201 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC18.8■□□□□ 0.6
BRPF1P55201 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC18.8■□□□□ 0.6
BRPF1P55201 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC18.8■□□□□ 0.6
BRPF1P55201 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC18.8■□□□□ 0.6
BRPF1P55201 CYGB-203ENST00000589145 788 ntTSL 3 BASIC18.8■□□□□ 0.6
BRPF1P55201 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC18.8■□□□□ 0.6
BRPF1P55201 AL136301.1-201ENST00000615830 422 ntBASIC18.8■□□□□ 0.6
BRPF1P55201 AC244157.2-201ENST00000616239 1006 ntBASIC18.8■□□□□ 0.6
BRPF1P55201 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
BRPF1P55201 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC18.8■□□□□ 0.6
BRPF1P55201 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC18.8■□□□□ 0.6
BRPF1P55201 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.8■□□□□ 0.6
BRPF1P55201 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BRPF1P55201 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC18.8■□□□□ 0.6
BRPF1P55201 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC18.8■□□□□ 0.6
BRPF1P55201 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRPF1P55201 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRPF1P55201 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRPF1P55201 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRPF1P55201 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BRPF1P55201 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRPF1P55201 ADK-205ENST00000539909 1866 ntTSL 2 BASIC18.8■□□□□ 0.6
BRPF1P55201 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRPF1P55201 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
BRPF1P55201 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRPF1P55201 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC18.79■□□□□ 0.6
BRPF1P55201 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRPF1P55201 USP4-203ENST00000415188 1454 ntTSL 3 BASIC18.79■□□□□ 0.6
BRPF1P55201 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRPF1P55201 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRPF1P55201 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRPF1P55201 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
BRPF1P55201 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC18.79■□□□□ 0.6
BRPF1P55201 BTBD6P1-201ENST00000412176 1267 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms