Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 AC104982.3-201ENST00000581995 514 ntBASIC16.16■□□□□ 0.18
NCKAP1LP55160 MIR6074-201ENST00000612054 107 ntBASIC16.16■□□□□ 0.18
NCKAP1LP55160 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.16■□□□□ 0.18
NCKAP1LP55160 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCKAP1LP55160 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCKAP1LP55160 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCKAP1LP55160 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCKAP1LP55160 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NCKAP1LP55160 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCKAP1LP55160 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCKAP1LP55160 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.16■□□□□ 0.18
NCKAP1LP55160 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.16■□□□□ 0.18
NCKAP1LP55160 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NCKAP1LP55160 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
NCKAP1LP55160 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.16■□□□□ 0.18
NCKAP1LP55160 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NCKAP1LP55160 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCKAP1LP55160 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NCKAP1LP55160 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NCKAP1LP55160 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.15■□□□□ 0.18
NCKAP1LP55160 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCKAP1LP55160 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCKAP1LP55160 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCKAP1LP55160 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NCKAP1LP55160 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCKAP1LP55160 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCKAP1LP55160 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCKAP1LP55160 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NCKAP1LP55160 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCKAP1LP55160 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCKAP1LP55160 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCKAP1LP55160 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCKAP1LP55160 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
NCKAP1LP55160 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.15■□□□□ 0.18
NCKAP1LP55160 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NCKAP1LP55160 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.15■□□□□ 0.18
NCKAP1LP55160 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.15■□□□□ 0.18
NCKAP1LP55160 AC108725.1-201ENST00000495472 409 ntBASIC16.15■□□□□ 0.18
NCKAP1LP55160 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.15■□□□□ 0.18
NCKAP1LP55160 FAM8A2P-201ENST00000528813 1142 ntBASIC16.15■□□□□ 0.18
NCKAP1LP55160 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.15■□□□□ 0.18
NCKAP1LP55160 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NCKAP1LP55160 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCKAP1LP55160 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCKAP1LP55160 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NCKAP1LP55160 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
NCKAP1LP55160 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCKAP1LP55160 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCKAP1LP55160 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.15■□□□□ 0.18
NCKAP1LP55160 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.15■□□□□ 0.18
NCKAP1LP55160 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCKAP1LP55160 AC007686.3-201ENST00000619017 3487 ntBASIC16.15■□□□□ 0.18
NCKAP1LP55160 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCKAP1LP55160 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCKAP1LP55160 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NCKAP1LP55160 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
NCKAP1LP55160 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCKAP1LP55160 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
NCKAP1LP55160 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.15■□□□□ 0.18
NCKAP1LP55160 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
NCKAP1LP55160 TMBIM7P-202ENST00000641474 1516 ntBASIC16.14■□□□□ 0.18
NCKAP1LP55160 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NCKAP1LP55160 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCKAP1LP55160 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCKAP1LP55160 KRT8P29-201ENST00000420409 1371 ntBASIC16.14■□□□□ 0.17
NCKAP1LP55160 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
NCKAP1LP55160 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCKAP1LP55160 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.14■□□□□ 0.17
NCKAP1LP55160 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCKAP1LP55160 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.14■□□□□ 0.17
NCKAP1LP55160 BX640514.1-201ENST00000583223 1918 ntBASIC16.14■□□□□ 0.17
NCKAP1LP55160 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.14■□□□□ 0.17
NCKAP1LP55160 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCKAP1LP55160 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCKAP1LP55160 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCKAP1LP55160 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCKAP1LP55160 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.14■□□□□ 0.17
NCKAP1LP55160 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
NCKAP1LP55160 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.14■□□□□ 0.17
NCKAP1LP55160 AC027237.1-201ENST00000560942 655 ntBASIC16.14■□□□□ 0.17
NCKAP1LP55160 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NCKAP1LP55160 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NCKAP1LP55160 AC005324.6-201ENST00000587972 613 ntBASIC16.14■□□□□ 0.17
NCKAP1LP55160 AC022748.3-201ENST00000621828 275 ntBASIC16.14■□□□□ 0.17
NCKAP1LP55160 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.14■□□□□ 0.17
NCKAP1LP55160 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NCKAP1LP55160 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
NCKAP1LP55160 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.14■□□□□ 0.17
NCKAP1LP55160 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCKAP1LP55160 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCKAP1LP55160 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCKAP1LP55160 AL008718.2-201ENST00000609206 1313 ntBASIC16.14■□□□□ 0.17
NCKAP1LP55160 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.14■□□□□ 0.17
NCKAP1LP55160 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
NCKAP1LP55160 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.14■□□□□ 0.17
NCKAP1LP55160 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCKAP1LP55160 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCKAP1LP55160 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCKAP1LP55160 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCKAP1LP55160 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms