Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.24□□□□□ -0.29
HOXC12P31275 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
HOXC12P31275 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.24□□□□□ -0.29
HOXC12P31275 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
HOXC12P31275 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.24□□□□□ -0.29
HOXC12P31275 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.24□□□□□ -0.29
HOXC12P31275 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.24□□□□□ -0.29
HOXC12P31275 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.24□□□□□ -0.29
HOXC12P31275 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HOXC12P31275 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.23□□□□□ -0.29
HOXC12P31275 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HOXC12P31275 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HOXC12P31275 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.23□□□□□ -0.29
HOXC12P31275 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.23□□□□□ -0.29
HOXC12P31275 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.23□□□□□ -0.29
HOXC12P31275 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
HOXC12P31275 AL359258.3-201ENST00000622910 2331 ntBASIC13.23□□□□□ -0.29
HOXC12P31275 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
HOXC12P31275 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.23□□□□□ -0.29
HOXC12P31275 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HOXC12P31275 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.23□□□□□ -0.29
HOXC12P31275 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.23□□□□□ -0.29
HOXC12P31275 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
HOXC12P31275 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HOXC12P31275 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HOXC12P31275 AC006001.1-201ENST00000325130 474 ntBASIC13.23□□□□□ -0.29
HOXC12P31275 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
HOXC12P31275 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HOXC12P31275 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
HOXC12P31275 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.23□□□□□ -0.29
HOXC12P31275 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
HOXC12P31275 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
HOXC12P31275 CD8B2-202ENST00000417670 633 ntBASIC13.23□□□□□ -0.29
HOXC12P31275 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.23□□□□□ -0.29
HOXC12P31275 AL590640.2-201ENST00000457038 527 ntBASIC13.23□□□□□ -0.29
HOXC12P31275 SCARNA20.5-201ENST00000516991 142 ntBASIC13.23□□□□□ -0.29
HOXC12P31275 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
HOXC12P31275 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.23□□□□□ -0.29
HOXC12P31275 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.23□□□□□ -0.29
HOXC12P31275 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.23□□□□□ -0.29
HOXC12P31275 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.23□□□□□ -0.29
HOXC12P31275 ACTG1P17-201ENST00000558391 1119 ntBASIC13.23□□□□□ -0.29
HOXC12P31275 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.23□□□□□ -0.29
HOXC12P31275 AC079416.2-201ENST00000625035 1193 ntBASIC13.23□□□□□ -0.29
HOXC12P31275 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.23□□□□□ -0.29
HOXC12P31275 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.23□□□□□ -0.29
HOXC12P31275 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HOXC12P31275 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.23□□□□□ -0.29
HOXC12P31275 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
HOXC12P31275 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HOXC12P31275 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HOXC12P31275 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HOXC12P31275 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.23□□□□□ -0.29
HOXC12P31275 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.23□□□□□ -0.29
HOXC12P31275 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HOXC12P31275 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HOXC12P31275 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HOXC12P31275 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.23□□□□□ -0.29
HOXC12P31275 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HOXC12P31275 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HOXC12P31275 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HOXC12P31275 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.23□□□□□ -0.29
HOXC12P31275 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
HOXC12P31275 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
HOXC12P31275 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HOXC12P31275 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
HOXC12P31275 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HOXC12P31275 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.22□□□□□ -0.29
HOXC12P31275 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HOXC12P31275 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
HOXC12P31275 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HOXC12P31275 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HOXC12P31275 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HOXC12P31275 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HOXC12P31275 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HOXC12P31275 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HOXC12P31275 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HOXC12P31275 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
HOXC12P31275 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
HOXC12P31275 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC13.22□□□□□ -0.29
HOXC12P31275 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.22□□□□□ -0.29
HOXC12P31275 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.22□□□□□ -0.29
HOXC12P31275 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HOXC12P31275 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.22□□□□□ -0.29
HOXC12P31275 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.22□□□□□ -0.29
HOXC12P31275 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HOXC12P31275 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HOXC12P31275 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.22□□□□□ -0.29
HOXC12P31275 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
HOXC12P31275 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.22□□□□□ -0.29
HOXC12P31275 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
HOXC12P31275 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms