Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 OR10B1P-201ENST00000601666 907 ntBASIC14.99□□□□□ -0.01
HLA-DPA1P20036 AL162274.1-201ENST00000617191 1098 ntBASIC14.99□□□□□ -0.01
HLA-DPA1P20036 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 AC015802.1-201ENST00000588104 1449 ntBASIC14.99□□□□□ -0.01
HLA-DPA1P20036 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 AC007191.1-201ENST00000623179 2995 ntBASIC14.98□□□□□ -0.01
HLA-DPA1P20036 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 AP000812.2-201ENST00000538934 718 ntBASIC14.98□□□□□ -0.01
HLA-DPA1P20036 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 RHOXF1P1-202ENST00000635473 501 ntBASIC14.98□□□□□ -0.01
HLA-DPA1P20036 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 AC067750.1-201ENST00000608826 6545 ntBASIC14.98□□□□□ -0.01
HLA-DPA1P20036 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DPA1P20036 AP001267.2-201ENST00000532619 2086 ntBASIC14.97□□□□□ -0.01
HLA-DPA1P20036 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 AC004945.1-201ENST00000416738 983 ntBASIC14.97□□□□□ -0.01
HLA-DPA1P20036 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 RPL7P3-201ENST00000441388 714 ntBASIC14.97□□□□□ -0.01
HLA-DPA1P20036 GPR53P-205ENST00000457298 1084 ntBASIC14.97□□□□□ -0.01
HLA-DPA1P20036 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 AP003171.2-201ENST00000528208 925 ntBASIC14.97□□□□□ -0.01
HLA-DPA1P20036 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms