Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.57■□□□□ 0.24
HMGCRP04035 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGCRP04035 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.56■□□□□ 0.24
HMGCRP04035 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCRP04035 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCRP04035 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCRP04035 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.56■□□□□ 0.24
HMGCRP04035 TMBIM7P-202ENST00000641474 1516 ntBASIC16.56■□□□□ 0.24
HMGCRP04035 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCRP04035 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCRP04035 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.56■□□□□ 0.24
HMGCRP04035 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.56■□□□□ 0.24
HMGCRP04035 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCRP04035 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCRP04035 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCRP04035 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCRP04035 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCRP04035 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC16.56■□□□□ 0.24
HMGCRP04035 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCRP04035 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.56■□□□□ 0.24
HMGCRP04035 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC16.56■□□□□ 0.24
HMGCRP04035 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.56■□□□□ 0.24
HMGCRP04035 AC026410.1-201ENST00000507366 1101 ntBASIC16.56■□□□□ 0.24
HMGCRP04035 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC16.56■□□□□ 0.24
HMGCRP04035 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC16.56■□□□□ 0.24
HMGCRP04035 MIR4472-1-201ENST00000584349 80 ntBASIC16.56■□□□□ 0.24
HMGCRP04035 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCRP04035 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCRP04035 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HMGCRP04035 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HMGCRP04035 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCRP04035 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.56■□□□□ 0.24
HMGCRP04035 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCRP04035 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCRP04035 LINC00554-201ENST00000564841 3011 ntBASIC16.56■□□□□ 0.24
HMGCRP04035 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HMGCRP04035 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.56■□□□□ 0.24
HMGCRP04035 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.56■□□□□ 0.24
HMGCRP04035 AC092384.3-202ENST00000564646 2873 ntBASIC16.56■□□□□ 0.24
HMGCRP04035 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGCRP04035 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCRP04035 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCRP04035 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCRP04035 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCRP04035 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCRP04035 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.55■□□□□ 0.24
HMGCRP04035 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCRP04035 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCRP04035 PPT1-215ENST00000641471 2368 ntBASIC16.55■□□□□ 0.24
HMGCRP04035 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCRP04035 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.55■□□□□ 0.24
HMGCRP04035 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCRP04035 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCRP04035 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.55■□□□□ 0.24
HMGCRP04035 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGCRP04035 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCRP04035 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGCRP04035 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.55■□□□□ 0.24
HMGCRP04035 DNM1P51-201ENST00000558149 522 ntBASIC16.55■□□□□ 0.24
HMGCRP04035 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.55■□□□□ 0.24
HMGCRP04035 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC16.55■□□□□ 0.24
HMGCRP04035 AC005041.3-201ENST00000606287 649 ntBASIC16.55■□□□□ 0.24
HMGCRP04035 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.55■□□□□ 0.24
HMGCRP04035 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGCRP04035 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGCRP04035 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.55■□□□□ 0.24
HMGCRP04035 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCRP04035 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCRP04035 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.55■□□□□ 0.24
HMGCRP04035 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.55■□□□□ 0.24
HMGCRP04035 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCRP04035 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.55■□□□□ 0.24
HMGCRP04035 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCRP04035 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCRP04035 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGCRP04035 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGCRP04035 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCRP04035 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCRP04035 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGCRP04035 AC112693.3-201ENST00000624819 1983 ntBASIC16.55■□□□□ 0.24
HMGCRP04035 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCRP04035 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCRP04035 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCRP04035 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCRP04035 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
HMGCRP04035 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCRP04035 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HMGCRP04035 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGCRP04035 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
HMGCRP04035 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCRP04035 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCRP04035 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCRP04035 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.54■□□□□ 0.24
HMGCRP04035 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HMGCRP04035 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCRP04035 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCRP04035 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCRP04035 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.54■□□□□ 0.24
HMGCRP04035 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCRP04035 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms