Protein–RNA interactions for Protein: O60488

ACSL4, Long-chain-fatty-acid--CoA ligase 4, humanhuman

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL4O60488 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.22■□□□□ 0.03
ACSL4O60488 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
ACSL4O60488 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
ACSL4O60488 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ACSL4O60488 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ACSL4O60488 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ACSL4O60488 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ACSL4O60488 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ACSL4O60488 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ACSL4O60488 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.22■□□□□ 0.03
ACSL4O60488 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.22■□□□□ 0.03
ACSL4O60488 NKAIN1P1-201ENST00000435754 582 ntBASIC15.22■□□□□ 0.03
ACSL4O60488 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.22■□□□□ 0.03
ACSL4O60488 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.22■□□□□ 0.03
ACSL4O60488 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.22■□□□□ 0.03
ACSL4O60488 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.22■□□□□ 0.03
ACSL4O60488 AC044849.1-201ENST00000519737 1188 ntBASIC15.22■□□□□ 0.03
ACSL4O60488 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.22■□□□□ 0.03
ACSL4O60488 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.22■□□□□ 0.03
ACSL4O60488 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
ACSL4O60488 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ACSL4O60488 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.22■□□□□ 0.03
ACSL4O60488 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.22■□□□□ 0.03
ACSL4O60488 Z98259.2-201ENST00000641583 609 ntBASIC15.22■□□□□ 0.03
ACSL4O60488 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ACSL4O60488 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ACSL4O60488 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ACSL4O60488 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.22■□□□□ 0.03
ACSL4O60488 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.22■□□□□ 0.03
ACSL4O60488 AC004899.1-201ENST00000424687 1714 ntBASIC15.22■□□□□ 0.03
ACSL4O60488 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ACSL4O60488 AC139712.1-201ENST00000378256 1875 ntBASIC15.22■□□□□ 0.03
ACSL4O60488 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
ACSL4O60488 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ACSL4O60488 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
ACSL4O60488 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ACSL4O60488 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ACSL4O60488 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ACSL4O60488 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ACSL4O60488 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ACSL4O60488 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.22■□□□□ 0.03
ACSL4O60488 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
ACSL4O60488 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ACSL4O60488 MTHFR-210ENST00000641407 2387 ntBASIC15.21■□□□□ 0.03
ACSL4O60488 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
ACSL4O60488 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ACSL4O60488 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ACSL4O60488 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.21■□□□□ 0.03
ACSL4O60488 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ACSL4O60488 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ACSL4O60488 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ACSL4O60488 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ACSL4O60488 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ACSL4O60488 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ACSL4O60488 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ACSL4O60488 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ACSL4O60488 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ACSL4O60488 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ACSL4O60488 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.21■□□□□ 0.03
ACSL4O60488 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.21■□□□□ 0.03
ACSL4O60488 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.21■□□□□ 0.03
ACSL4O60488 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
ACSL4O60488 DPM3-202ENST00000368399 517 ntBASIC15.21■□□□□ 0.03
ACSL4O60488 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ACSL4O60488 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ACSL4O60488 AL157407.1-201ENST00000435784 904 ntBASIC15.21■□□□□ 0.03
ACSL4O60488 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.21■□□□□ 0.03
ACSL4O60488 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.21■□□□□ 0.03
ACSL4O60488 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.21■□□□□ 0.03
ACSL4O60488 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.21■□□□□ 0.03
ACSL4O60488 AC005740.2-201ENST00000511085 419 ntBASIC15.21■□□□□ 0.03
ACSL4O60488 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.21■□□□□ 0.03
ACSL4O60488 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ACSL4O60488 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.21■□□□□ 0.03
ACSL4O60488 RN7SL163P-201ENST00000583100 276 ntBASIC15.21■□□□□ 0.03
ACSL4O60488 AC009884.2-201ENST00000603110 324 ntBASIC15.21■□□□□ 0.03
ACSL4O60488 AC244452.3-201ENST00000636814 210 ntBASIC15.21■□□□□ 0.03
ACSL4O60488 AC004923.1-202ENST00000642106 209 ntBASIC15.21■□□□□ 0.03
ACSL4O60488 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.21■□□□□ 0.03
ACSL4O60488 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ACSL4O60488 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ACSL4O60488 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ACSL4O60488 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.21■□□□□ 0.03
ACSL4O60488 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.21■□□□□ 0.02
ACSL4O60488 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.21■□□□□ 0.02
ACSL4O60488 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
ACSL4O60488 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
ACSL4O60488 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
ACSL4O60488 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.21■□□□□ 0.02
ACSL4O60488 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ACSL4O60488 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.21■□□□□ 0.02
ACSL4O60488 AC015688.4-201ENST00000580780 1647 ntBASIC15.21■□□□□ 0.02
ACSL4O60488 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.21■□□□□ 0.02
ACSL4O60488 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
ACSL4O60488 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.2■□□□□ 0.02
ACSL4O60488 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ACSL4O60488 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ACSL4O60488 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ACSL4O60488 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ACSL4O60488 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms