Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 HTR5BP-201ENST00000430851 1154 ntBASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 AC007969.1-201ENST00000433675 447 ntBASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 SDHAP3-202ENST00000515467 728 ntBASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 AC131206.1-201ENST00000538078 1211 ntBASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 AC026434.2-201ENST00000506094 1078 ntBASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 SORD2P-201ENST00000558556 1069 ntBASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 AL513210.1-201ENST00000629608 234 ntBASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TCRBV3S1A0A5B6 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms