Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 PUDPP3-201ENST00000445368 636 ntBASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 MIR4783-201ENST00000580343 82 ntBASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 NIN-202ENST00000324330 4364 ntTSL 5 BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTDP1Q9Y5B0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 RN7SL769P-201ENST00000469386 295 ntBASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 RN7SL720P-201ENST00000488178 304 ntBASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 AC125604.1-201ENST00000496255 707 ntBASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 AC005962.1-201ENST00000584100 773 ntBASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 MIR6720-201ENST00000611664 98 ntBASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTDP1Q9Y5B0 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTDP1Q9Y5B0 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTDP1Q9Y5B0 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTDP1Q9Y5B0 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTDP1Q9Y5B0 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTDP1Q9Y5B0 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTDP1Q9Y5B0 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTDP1Q9Y5B0 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC17.1■□□□□ 0.33
CTDP1Q9Y5B0 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms