Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 AC005562.1-201ENST00000583030 3219 ntBASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 Z97205.2-201ENST00000564697 1639 ntBASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 AC004899.2-201ENST00000622993 3860 ntBASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 AC130686.1-201ENST00000622936 2466 ntBASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 MRPL3P1-201ENST00000400109 1033 ntBASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 ADH5P3-201ENST00000433842 1137 ntBASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 AL591424.1-201ENST00000442569 1213 ntBASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 RPL13AP23-201ENST00000480739 586 ntBASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 AC003101.2-201ENST00000612557 442 ntBASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 ZNF259P1-201ENST00000407656 1365 ntBASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 AC090505.1-201ENST00000430515 1834 ntBASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 AR-208ENST00000612452 10676 ntTSL 5 BASIC12.5□□□□□ -0.41
KCNIP3Q9Y2W7 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP3Q9Y2W7 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP3Q9Y2W7 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
KCNIP3Q9Y2W7 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP3Q9Y2W7 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP3Q9Y2W7 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP3Q9Y2W7 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP3Q9Y2W7 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP3Q9Y2W7 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP3Q9Y2W7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP3Q9Y2W7 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP3Q9Y2W7 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.49□□□□□ -0.41
KCNIP3Q9Y2W7 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP3Q9Y2W7 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP3Q9Y2W7 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP3Q9Y2W7 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP3Q9Y2W7 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP3Q9Y2W7 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.49□□□□□ -0.41
KCNIP3Q9Y2W7 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP3Q9Y2W7 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.49□□□□□ -0.41
KCNIP3Q9Y2W7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms