Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COPS3Q9UNS2 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
COPS3Q9UNS2 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
COPS3Q9UNS2 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
COPS3Q9UNS2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COPS3Q9UNS2 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
COPS3Q9UNS2 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COPS3Q9UNS2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
COPS3Q9UNS2 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.32□□□□□ -0.28
COPS3Q9UNS2 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
COPS3Q9UNS2 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COPS3Q9UNS2 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 MBLAC2-202ENST00000514906 1936 ntBASIC13.31□□□□□ -0.28
COPS3Q9UNS2 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 MIR943-201ENST00000401286 94 ntBASIC13.31□□□□□ -0.28
COPS3Q9UNS2 AC241585.1-201ENST00000433527 519 ntBASIC13.31□□□□□ -0.28
COPS3Q9UNS2 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 AC067863.1-201ENST00000494933 530 ntBASIC13.31□□□□□ -0.28
COPS3Q9UNS2 IGHV3-42-201ENST00000520410 361 ntBASIC13.31□□□□□ -0.28
COPS3Q9UNS2 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 AC135586.1-201ENST00000539323 574 ntBASIC13.31□□□□□ -0.28
COPS3Q9UNS2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
COPS3Q9UNS2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 FAM86GP-201ENST00000448322 971 ntBASIC13.3□□□□□ -0.28
COPS3Q9UNS2 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 AC036164.1-201ENST00000570544 333 ntBASIC13.3□□□□□ -0.28
COPS3Q9UNS2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COPS3Q9UNS2 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms