Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCM2LQ9NUG4 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCM2LQ9NUG4 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCM2LQ9NUG4 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.21□□□□□ -0.14
CCM2LQ9NUG4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CCM2LQ9NUG4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCM2LQ9NUG4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
CCM2LQ9NUG4 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CCM2LQ9NUG4 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 AC012617.1-204ENST00000586340 2305 ntBASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 AL353705.2-201ENST00000428243 662 ntBASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 RN7SL752P-201ENST00000463779 287 ntBASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 HLA-V-204ENST00000476601 1289 ntBASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 AL606495.2-201ENST00000605867 535 ntBASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 IGHV3-72-202ENST00000621503 303 ntBASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 KRT8P12-202ENST00000472924 1397 ntBASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 AC015909.5-201ENST00000624336 2266 ntBASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.2□□□□□ -0.14
CCM2LQ9NUG4 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 DGCR5-201ENST00000399539 862 ntBASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 AP006294.1-201ENST00000415407 339 ntBASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 ACA64.2-201ENST00000459014 129 ntBASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 AC008738.7-201ENST00000609744 511 ntBASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 MIR6805-201ENST00000615055 62 ntBASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms