Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VTA1Q9NP79 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VTA1Q9NP79 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VTA1Q9NP79 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.45■□□□□ 0.22
VTA1Q9NP79 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.45■□□□□ 0.22
VTA1Q9NP79 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VTA1Q9NP79 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VTA1Q9NP79 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
VTA1Q9NP79 KRT8P31-201ENST00000504812 1408 ntBASIC16.45■□□□□ 0.22
VTA1Q9NP79 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VTA1Q9NP79 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VTA1Q9NP79 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VTA1Q9NP79 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
VTA1Q9NP79 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
VTA1Q9NP79 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VTA1Q9NP79 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
VTA1Q9NP79 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VTA1Q9NP79 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VTA1Q9NP79 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.44■□□□□ 0.22
VTA1Q9NP79 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
VTA1Q9NP79 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.44■□□□□ 0.22
VTA1Q9NP79 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VTA1Q9NP79 KHSRPP1-201ENST00000427983 1768 ntBASIC16.44■□□□□ 0.22
VTA1Q9NP79 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
VTA1Q9NP79 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VTA1Q9NP79 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VTA1Q9NP79 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
VTA1Q9NP79 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VTA1Q9NP79 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VTA1Q9NP79 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
VTA1Q9NP79 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
VTA1Q9NP79 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VTA1Q9NP79 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.44■□□□□ 0.22
VTA1Q9NP79 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VTA1Q9NP79 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VTA1Q9NP79 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.44■□□□□ 0.22
VTA1Q9NP79 ST13P19-201ENST00000442505 1124 ntBASIC16.44■□□□□ 0.22
VTA1Q9NP79 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.44■□□□□ 0.22
VTA1Q9NP79 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.44■□□□□ 0.22
VTA1Q9NP79 FOS-204ENST00000554617 796 ntTSL 2 BASIC16.44■□□□□ 0.22
VTA1Q9NP79 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.44■□□□□ 0.22
VTA1Q9NP79 AL109954.1-202ENST00000564051 2148 ntBASIC16.44■□□□□ 0.22
VTA1Q9NP79 AC124068.2-201ENST00000569473 1109 ntBASIC16.44■□□□□ 0.22
VTA1Q9NP79 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.44■□□□□ 0.22
VTA1Q9NP79 SIGLEC18P-201ENST00000602271 909 ntBASIC16.44■□□□□ 0.22
VTA1Q9NP79 RN7SL736P-201ENST00000613111 269 ntBASIC16.44■□□□□ 0.22
VTA1Q9NP79 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VTA1Q9NP79 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VTA1Q9NP79 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.44■□□□□ 0.22
VTA1Q9NP79 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.44■□□□□ 0.22
VTA1Q9NP79 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VTA1Q9NP79 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.44■□□□□ 0.22
VTA1Q9NP79 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VTA1Q9NP79 PPT1-215ENST00000641471 2368 ntBASIC16.44■□□□□ 0.22
VTA1Q9NP79 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
VTA1Q9NP79 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
VTA1Q9NP79 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VTA1Q9NP79 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VTA1Q9NP79 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VTA1Q9NP79 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VTA1Q9NP79 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VTA1Q9NP79 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.43■□□□□ 0.22
VTA1Q9NP79 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VTA1Q9NP79 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VTA1Q9NP79 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.43■□□□□ 0.22
VTA1Q9NP79 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.43■□□□□ 0.22
VTA1Q9NP79 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
VTA1Q9NP79 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.43■□□□□ 0.22
VTA1Q9NP79 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
VTA1Q9NP79 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.43■□□□□ 0.22
VTA1Q9NP79 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.43■□□□□ 0.22
VTA1Q9NP79 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VTA1Q9NP79 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VTA1Q9NP79 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
VTA1Q9NP79 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VTA1Q9NP79 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VTA1Q9NP79 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
VTA1Q9NP79 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VTA1Q9NP79 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
VTA1Q9NP79 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
VTA1Q9NP79 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VTA1Q9NP79 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.43■□□□□ 0.22
VTA1Q9NP79 RN7SL530P-201ENST00000485097 298 ntBASIC16.43■□□□□ 0.22
VTA1Q9NP79 AC114947.1-202ENST00000514136 344 ntBASIC16.43■□□□□ 0.22
VTA1Q9NP79 AP002803.1-201ENST00000528836 498 ntBASIC16.43■□□□□ 0.22
VTA1Q9NP79 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.43■□□□□ 0.22
VTA1Q9NP79 AL022334.2-201ENST00000610000 484 ntBASIC16.43■□□□□ 0.22
VTA1Q9NP79 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
VTA1Q9NP79 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VTA1Q9NP79 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VTA1Q9NP79 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VTA1Q9NP79 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.43■□□□□ 0.22
VTA1Q9NP79 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.43■□□□□ 0.22
VTA1Q9NP79 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VTA1Q9NP79 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VTA1Q9NP79 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
VTA1Q9NP79 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.43■□□□□ 0.22
VTA1Q9NP79 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.43■□□□□ 0.22
VTA1Q9NP79 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
VTA1Q9NP79 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms