Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.24□□□□□ -0.29
VRK1Q99986 KRT223P-202ENST00000449164 1292 ntBASIC13.24□□□□□ -0.29
VRK1Q99986 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.24□□□□□ -0.29
VRK1Q99986 USP32P1-208ENST00000506594 1164 ntBASIC13.24□□□□□ -0.29
VRK1Q99986 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.24□□□□□ -0.29
VRK1Q99986 AP001582.1-201ENST00000525856 295 ntBASIC13.24□□□□□ -0.29
VRK1Q99986 AP005482.1-201ENST00000563722 1273 ntBASIC13.24□□□□□ -0.29
VRK1Q99986 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.24□□□□□ -0.29
VRK1Q99986 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
VRK1Q99986 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.24□□□□□ -0.29
VRK1Q99986 AC000095.1-201ENST00000603208 874 ntBASIC13.24□□□□□ -0.29
VRK1Q99986 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.24□□□□□ -0.29
VRK1Q99986 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.24□□□□□ -0.29
VRK1Q99986 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.24□□□□□ -0.29
VRK1Q99986 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
VRK1Q99986 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VRK1Q99986 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
VRK1Q99986 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.24□□□□□ -0.29
VRK1Q99986 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
VRK1Q99986 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
VRK1Q99986 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
VRK1Q99986 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VRK1Q99986 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
VRK1Q99986 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VRK1Q99986 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
VRK1Q99986 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VRK1Q99986 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
VRK1Q99986 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VRK1Q99986 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VRK1Q99986 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VRK1Q99986 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.23□□□□□ -0.29
VRK1Q99986 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.23□□□□□ -0.29
VRK1Q99986 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.23□□□□□ -0.29
VRK1Q99986 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
VRK1Q99986 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.23□□□□□ -0.29
VRK1Q99986 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
VRK1Q99986 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
VRK1Q99986 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
VRK1Q99986 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.23□□□□□ -0.29
VRK1Q99986 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
VRK1Q99986 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.23□□□□□ -0.29
VRK1Q99986 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
VRK1Q99986 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.23□□□□□ -0.29
VRK1Q99986 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 RPS2P32-201ENST00000439199 892 ntBASIC13.23□□□□□ -0.29
VRK1Q99986 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.23□□□□□ -0.29
VRK1Q99986 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 AC015910.1-201ENST00000579400 975 ntBASIC13.23□□□□□ -0.29
VRK1Q99986 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
VRK1Q99986 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.23□□□□□ -0.29
VRK1Q99986 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
VRK1Q99986 MIR6775-201ENST00000617557 69 ntBASIC13.23□□□□□ -0.29
VRK1Q99986 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.23□□□□□ -0.29
VRK1Q99986 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.23□□□□□ -0.29
VRK1Q99986 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
VRK1Q99986 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.23□□□□□ -0.29
VRK1Q99986 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.23□□□□□ -0.29
VRK1Q99986 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.23□□□□□ -0.29
VRK1Q99986 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.23□□□□□ -0.29
VRK1Q99986 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VRK1Q99986 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
VRK1Q99986 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
VRK1Q99986 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
VRK1Q99986 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VRK1Q99986 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VRK1Q99986 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VRK1Q99986 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VRK1Q99986 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VRK1Q99986 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VRK1Q99986 AC134312.5-201ENST00000568031 1313 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms