Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 AC099522.2-201ENST00000607001 744 ntBASIC11.33□□□□□ -0.6
AP1S3Q96PC3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 FOXO1B-201ENST00000504678 1527 ntBASIC11.33□□□□□ -0.6
AP1S3Q96PC3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 IKZF1-201ENST00000331340 6189 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 ARHGEF10-204ENST00000398564 5480 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 RIMKLA-202ENST00000431473 8909 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 AC140479.7-201ENST00000636301 2332 ntBASIC11.32□□□□□ -0.6
AP1S3Q96PC3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 PLEKHM1-201ENST00000430334 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 FYCO1-201ENST00000296137 8504 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 TMF1-201ENST00000398559 6849 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 PKP1-201ENST00000263946 5447 ntTSL 5 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 KRT18P56-201ENST00000507275 550 ntBASIC11.32□□□□□ -0.6
AP1S3Q96PC3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 FAM86C2P-203ENST00000528684 1004 ntBASIC11.32□□□□□ -0.6
AP1S3Q96PC3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 CD63-204ENST00000546939 779 ntTSL 3 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 AL135744.1-201ENST00000565098 629 ntBASIC11.32□□□□□ -0.6
AP1S3Q96PC3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 AP002472.1-201ENST00000577490 586 ntBASIC11.32□□□□□ -0.6
AP1S3Q96PC3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 CICP16-201ENST00000502609 2813 ntBASIC11.32□□□□□ -0.6
AP1S3Q96PC3 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 GNB5-201ENST00000261837 8906 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 CASP8AP2-205ENST00000551025 6151 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 CHFR-201ENST00000266880 11133 ntTSL 2 BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AP1S3Q96PC3 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 CD34-201ENST00000310833 8246 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 DRAXIN-201ENST00000294485 7346 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 NRP1-208ENST00000395995 5826 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 TNC-203ENST00000423613 6281 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 AL118506.1-201ENST00000601296 3082 ntBASIC11.31□□□□□ -0.6
AP1S3Q96PC3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
AP1S3Q96PC3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms