RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 DCAF8L2P0C7V8 631 aa19.14■□□□□ 0.65
TNC-203ENST00000423613 PELP1Q8IZL8 1130 aaKnown RBP18.3■□□□□ 0.52
TNC-203ENST00000423613 SUPT5HO00267 1087 aaKnown RBP17.87■□□□□ 0.45
TNC-203ENST00000423613 ERICH6Q7L0X2 663 aa17.86■□□□□ 0.45
TNC-203ENST00000423613 MYT1Q01538 1121 aa17.79■□□□□ 0.44
TNC-203ENST00000423613 EHMT2Q96KQ7 1210 aa17.74■□□□□ 0.43
TNC-203ENST00000423613 SHROOM4Q9ULL8 1493 aa17.49■□□□□ 0.39
TNC-203ENST00000423613 CCER1Q8TC90 406 aaPredicted RBP17.43■□□□□ 0.38
TNC-203ENST00000423613 NISCHQ9Y2I1 1504 aa17.41■□□□□ 0.38
TNC-203ENST00000423613 FAM9AQ8IZU1 332 aaPredicted RBP17.28■□□□□ 0.36
TNC-203ENST00000423613 CENPBP07199 599 aaPredicted RBP17.26■□□□□ 0.35
TNC-203ENST00000423613 APLP2Q06481 763 aa17.2■□□□□ 0.34
TNC-203ENST00000423613 TTBK1Q5TCY1 1321 aaPredicted RBP17.11■□□□□ 0.33
TNC-203ENST00000423613 YTHDC1Q96MU7 727 aaKnown RBP16.94■□□□□ 0.3
TNC-203ENST00000423613 PCGF6Q9BYE7 350 aa16.9■□□□□ 0.3
TNC-203ENST00000423613 RANGAP1P46060 587 aaPredicted RBP16.9■□□□□ 0.3
TNC-203ENST00000423613 ATP1B4Q9UN42 357 aaPredicted RBP16.87■□□□□ 0.29
TNC-203ENST00000423613 NEFLP07196 543 aa16.86■□□□□ 0.29
TNC-203ENST00000423613 DAXXQ9UER7 740 aaPredicted RBP16.66■□□□□ 0.26
TNC-203ENST00000423613 ZEB1P37275 1124 aaPredicted RBP16.61■□□□□ 0.25
TNC-203ENST00000423613 MYT1LQ9UL68 1186 aa16.54■□□□□ 0.24
TNC-203ENST00000423613 TRIM41Q8WV44 630 aa16.49■□□□□ 0.23
TNC-203ENST00000423613 RTL5Q5HYW3 569 aaPredicted RBP16.45■□□□□ 0.22
TNC-203ENST00000423613 UBTFP17480 764 aaKnown RBP16.35■□□□□ 0.21
TNC-203ENST00000423613 CHIC1Q5VXU3 224 aa16.34■□□□□ 0.21
TNC-203ENST00000423613 ZNF316A6NFI3 1004 aaPredicted RBP16.28■□□□□ 0.2
TNC-203ENST00000423613 PPARGC1BQ86YN6 1023 aaKnown RBP16.27■□□□□ 0.2
TNC-203ENST00000423613 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.25■□□□□ 0.19
TNC-203ENST00000423613 HNRNPUL2Q1KMD3 747 aaKnown RBP16.25■□□□□ 0.19
TNC-203ENST00000423613 POLR3GLQ9BT43 218 aa16.18■□□□□ 0.18
TNC-203ENST00000423613 EIF5BO60841 1220 aaKnown RBP16.16■□□□□ 0.18
TNC-203ENST00000423613 SLC4A1APQ9BWU0 796 aaKnown RBP16.1■□□□□ 0.17
TNC-203ENST00000423613 CNGB1Q14028 1251 aaPredicted RBP16.06■□□□□ 0.16
TNC-203ENST00000423613 HRCP23327 699 aa16.04■□□□□ 0.16
TNC-203ENST00000423613 TRIM26Q12899 539 aaPredicted RBP16.02■□□□□ 0.16
TNC-203ENST00000423613 ITGAEP38570 1179 aa16■□□□□ 0.15
TNC-203ENST00000423613 CLSPNQ9HAW4 1339 aa15.98■□□□□ 0.15
TNC-203ENST00000423613 GLIPR1L2Q4G1C9 344 aa15.95■□□□□ 0.14
TNC-203ENST00000423613 BCANQ96GW7 911 aa15.94■□□□□ 0.14
TNC-203ENST00000423613 GTF3C3Q9Y5Q9 886 aa15.87■□□□□ 0.13
TNC-203ENST00000423613 LOC105371045A0A1W2PR82 267 aa15.82■□□□□ 0.12
TNC-203ENST00000423613 CDK11AQ9UQ88 783 aaPredicted RBP15.75■□□□□ 0.11
TNC-203ENST00000423613 DIEXFQ68CQ4 756 aaKnown RBP15.71■□□□□ 0.1
TNC-203ENST00000423613 SLC24A1O60721 1099 aa15.69■□□□□ 0.1
TNC-203ENST00000423613 NPM2Q86SE8 214 aaKnown RBP15.56■□□□□ 0.08
TNC-203ENST00000423613 ANP32AP39687 249 aaKnown RBP15.55■□□□□ 0.08
TNC-203ENST00000423613 BCL11AQ9H165 835 aa15.53■□□□□ 0.08
TNC-203ENST00000423613 FBLN2P98095 1184 aa15.52■□□□□ 0.07
TNC-203ENST00000423613 ANP32BQ92688 251 aaKnown RBP15.5■□□□□ 0.07
TNC-203ENST00000423613 TRIM52Q96A61 297 aa15.49■□□□□ 0.07
TNC-203ENST00000423613 PLPPR3Q6T4P5 718 aa15.48■□□□□ 0.07
TNC-203ENST00000423613 NBR1Q14596 966 aa15.47■□□□□ 0.07
TNC-203ENST00000423613 FAM50AQ14320 339 aaKnown RBP15.47■□□□□ 0.07
TNC-203ENST00000423613 ZBTB47Q9UFB7 747 aaPredicted RBP15.47■□□□□ 0.07
TNC-203ENST00000423613 ARXQ96QS3 562 aa15.42■□□□□ 0.06
TNC-203ENST00000423613 ZNF326Q5BKZ1 582 aaKnown RBP15.4■□□□□ 0.06
TNC-203ENST00000423613 ACIN1Q9UKV3 1341 aaKnown RBP15.4■□□□□ 0.06
TNC-203ENST00000423613 NEUROD1Q13562 356 aa15.39■□□□□ 0.05
TNC-203ENST00000423613 ESF1Q9H501 851 aaKnown RBP15.31■□□□□ 0.04
TNC-203ENST00000423613 NEFMP07197 916 aa15.28■□□□□ 0.04
TNC-203ENST00000423613 AMER1Q5JTC6 1135 aaPredicted RBP15.28■□□□□ 0.04
TNC-203ENST00000423613 CANXP27824 592 aaKnown RBP15.27■□□□□ 0.03
TNC-203ENST00000423613 PABPN1Q86U42 306 aaKnown RBP eCLIP15.27■□□□□ 0.03
TNC-203ENST00000423613 ANP32CO43423 234 aa15.26■□□□□ 0.03
TNC-203ENST00000423613 TNNT2P45379 298 aaPredicted RBP15.26■□□□□ 0.03
TNC-203ENST00000423613 ARID3CA6NKF2 412 aa15.23■□□□□ 0.03
TNC-203ENST00000423613 HSP90AA1P07900 732 aaKnown RBP15.21■□□□□ 0.03
TNC-203ENST00000423613 FKBP8Q14318 412 aa15.19■□□□□ 0.02
TNC-203ENST00000423613 RTN4Q9NQC3 1192 aaKnown RBP15.19■□□□□ 0.02
TNC-203ENST00000423613 STAG3Q9UJ98 1225 aa15.18■□□□□ 0.02
TNC-203ENST00000423613 CDK11BP21127 795 aaKnown RBP15.17■□□□□ 0.02
TNC-203ENST00000423613 A0A0G2JS52 829 aa15.14■□□□□ 0.01
TNC-203ENST00000423613 SCAF1Q9H7N4 1312 aaKnown RBP15.13■□□□□ 0.01
TNC-203ENST00000423613 ZNF777Q9ULD5 760 aaPredicted RBP15.1■□□□□ 0.01
TNC-203ENST00000423613 CHGAP10645 457 aaKnown RBP15.1■□□□□ 0.01
TNC-203ENST00000423613 ABCC9O60706 1549 aa15.09■□□□□ 0.01
TNC-203ENST00000423613 NAP1L5Q96NT1 182 aaPredicted RBP15.07■□□□□ 0
TNC-203ENST00000423613 TRIM44Q96DX7 344 aaPredicted RBP15.03■□□□□ -0
TNC-203ENST00000423613 P3H3Q8IVL6 736 aa15.03■□□□□ -0
TNC-203ENST00000423613 ANP32EQ9BTT0 268 aa15.03■□□□□ -0
TNC-203ENST00000423613 UPF2Q9HAU5 1272 aaKnown RBP15.02■□□□□ -0
TNC-203ENST00000423613 NPM1P06748 294 aaKnown RBP eCLIP15.01□□□□□ -0.01
TNC-203ENST00000423613 PLEKHG5O94827 1062 aa14.98□□□□□ -0.01
TNC-203ENST00000423613 ZBTB7CA1YPR0 619 aa14.93□□□□□ -0.02
TNC-203ENST00000423613 CSRNP3Q8WYN3 585 aa14.93□□□□□ -0.02
TNC-203ENST00000423613 DNTTIP2Q5QJE6 756 aaKnown RBP14.92□□□□□ -0.02
TNC-203ENST00000423613 ERICH6BQ5W0A0 696 aa14.86□□□□□ -0.03
TNC-203ENST00000423613 PTMAP06454 111 aaKnown RBP14.84□□□□□ -0.03
TNC-203ENST00000423613 CCDC136Q96JN2 1154 aa14.84□□□□□ -0.03
TNC-203ENST00000423613 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.84□□□□□ -0.03
TNC-203ENST00000423613 SENP3Q9H4L4 574 aaPredicted RBP14.84□□□□□ -0.03
TNC-203ENST00000423613 ARID4BQ4LE39 1312 aaPredicted RBP14.83□□□□□ -0.04
TNC-203ENST00000423613 SALL2Q9Y467 1007 aaPredicted RBP14.82□□□□□ -0.04
TNC-203ENST00000423613 C14orf37Q86TY3 774 aa14.82□□□□□ -0.04
TNC-203ENST00000423613 IRX6P78412 446 aaPredicted RBP14.81□□□□□ -0.04
TNC-203ENST00000423613 TONSLQ96HA7 1378 aa14.81□□□□□ -0.04
TNC-203ENST00000423613 HNRNPUQ00839 825 aaKnown RBP eCLIP14.8□□□□□ -0.04
TNC-203ENST00000423613 NCLP19338 710 aaKnown RBP14.79□□□□□ -0.04
TNC-203ENST00000423613 HAP1P54257 671 aaPredicted RBP14.79□□□□□ -0.04
TNC-203ENST00000423613 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms