Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
STAG1Q8WVM7 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
STAG1Q8WVM7 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
STAG1Q8WVM7 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
STAG1Q8WVM7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
STAG1Q8WVM7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
STAG1Q8WVM7 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
STAG1Q8WVM7 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
STAG1Q8WVM7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
STAG1Q8WVM7 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.4■□□□□ 0.38
STAG1Q8WVM7 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
STAG1Q8WVM7 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
STAG1Q8WVM7 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.4■□□□□ 0.38
STAG1Q8WVM7 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
STAG1Q8WVM7 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
STAG1Q8WVM7 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
STAG1Q8WVM7 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
STAG1Q8WVM7 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
STAG1Q8WVM7 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
STAG1Q8WVM7 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.39■□□□□ 0.38
STAG1Q8WVM7 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.39■□□□□ 0.38
STAG1Q8WVM7 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
STAG1Q8WVM7 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
STAG1Q8WVM7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
STAG1Q8WVM7 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
STAG1Q8WVM7 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
STAG1Q8WVM7 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
STAG1Q8WVM7 AC063926.3-201ENST00000624734 5658 ntBASIC17.39■□□□□ 0.37
STAG1Q8WVM7 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
STAG1Q8WVM7 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.39■□□□□ 0.37
STAG1Q8WVM7 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
STAG1Q8WVM7 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
STAG1Q8WVM7 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.39■□□□□ 0.37
STAG1Q8WVM7 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.39■□□□□ 0.37
STAG1Q8WVM7 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.39■□□□□ 0.37
STAG1Q8WVM7 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.39■□□□□ 0.37
STAG1Q8WVM7 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.39■□□□□ 0.37
STAG1Q8WVM7 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.39■□□□□ 0.37
STAG1Q8WVM7 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.39■□□□□ 0.37
STAG1Q8WVM7 AC005324.6-201ENST00000587972 613 ntBASIC17.39■□□□□ 0.37
STAG1Q8WVM7 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.39■□□□□ 0.37
STAG1Q8WVM7 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.39■□□□□ 0.37
STAG1Q8WVM7 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
STAG1Q8WVM7 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
STAG1Q8WVM7 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
STAG1Q8WVM7 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
STAG1Q8WVM7 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.39■□□□□ 0.37
STAG1Q8WVM7 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
STAG1Q8WVM7 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
STAG1Q8WVM7 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
STAG1Q8WVM7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.39■□□□□ 0.37
STAG1Q8WVM7 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
STAG1Q8WVM7 KRT8P29-201ENST00000420409 1371 ntBASIC17.39■□□□□ 0.37
STAG1Q8WVM7 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
STAG1Q8WVM7 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.38■□□□□ 0.37
STAG1Q8WVM7 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 TUBB8P8-201ENST00000458717 1058 ntBASIC17.38■□□□□ 0.37
STAG1Q8WVM7 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 AC126915.1-201ENST00000522847 1038 ntBASIC17.38■□□□□ 0.37
STAG1Q8WVM7 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 AC007663.3-201ENST00000609632 465 ntBASIC17.38■□□□□ 0.37
STAG1Q8WVM7 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
STAG1Q8WVM7 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
STAG1Q8WVM7 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms