Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
NUP35Q8NFH5 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
NUP35Q8NFH5 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
NUP35Q8NFH5 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC11.14□□□□□ -0.63
NUP35Q8NFH5 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
NUP35Q8NFH5 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
NUP35Q8NFH5 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
NUP35Q8NFH5 GOLGA8IP-202ENST00000611635 2100 ntBASIC11.14□□□□□ -0.63
NUP35Q8NFH5 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
NUP35Q8NFH5 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
NUP35Q8NFH5 EML1-203ENST00000334192 4064 ntTSL 5 BASIC11.14□□□□□ -0.63
NUP35Q8NFH5 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 MIR346-201ENST00000362234 95 ntBASIC11.13□□□□□ -0.63
NUP35Q8NFH5 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 AC074338.1-201ENST00000416825 156 ntBASIC11.13□□□□□ -0.63
NUP35Q8NFH5 KRT18P67-201ENST00000432816 1264 ntBASIC11.13□□□□□ -0.63
NUP35Q8NFH5 AC098831.1-202ENST00000438821 336 ntBASIC11.13□□□□□ -0.63
NUP35Q8NFH5 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 TOLLIP-AS1-201ENST00000530897 939 ntBASIC11.13□□□□□ -0.63
NUP35Q8NFH5 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 AL135744.1-201ENST00000565098 629 ntBASIC11.13□□□□□ -0.63
NUP35Q8NFH5 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 AP000842.3-202ENST00000569238 1080 ntBASIC11.13□□□□□ -0.63
NUP35Q8NFH5 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 NCLP1-201ENST00000445357 1963 ntBASIC11.13□□□□□ -0.63
NUP35Q8NFH5 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 KHSRPP1-201ENST00000427983 1768 ntBASIC11.13□□□□□ -0.63
NUP35Q8NFH5 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC11.13□□□□□ -0.63
NUP35Q8NFH5 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 TFAMP1-201ENST00000412727 736 ntBASIC11.12□□□□□ -0.63
NUP35Q8NFH5 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 AC074386.1-202ENST00000463561 864 ntBASIC11.12□□□□□ -0.63
NUP35Q8NFH5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 SMN2-210ENST00000511812 867 ntTSL 2 BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 PRELID1P1-202ENST00000567272 903 ntBASIC11.12□□□□□ -0.63
NUP35Q8NFH5 INO80E-210ENST00000567705 880 ntTSL 3 BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 TBCB-205ENST00000585746 875 ntTSL 3 BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NUP35Q8NFH5 GPR39-203ENST00000622084 900 ntTSL 5 BASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms